Ornithinimicrobium ciconiae: FNH13_08890
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Entry
FNH13_08890 CDS
T06094
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
orz
Ornithinimicrobium ciconiae
Brite
KEGG Orthology (KO) [BR:
orz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orz03032
]
FNH13_08890
03400 DNA repair and recombination proteins [BR:
orz03400
]
FNH13_08890
Enzymes [BR:
orz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FNH13_08890
DNA replication proteins [BR:
orz03032
]
Prokaryotic type
DNA Topoisomerases
FNH13_08890
DNA repair and recombination proteins [BR:
orz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FNH13_08890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DnaJ
Motif
Other DBs
NCBI-ProteinID:
QDO88441
UniProt:
A0A516GA97
LinkDB
All DBs
Position
1957517..1958524
Genome browser
AA seq
335 aa
AA seq
DB search
MVRLRKVAPDDAGWTRRRAGTGFTYLDEDGERLPAEEAQRLKALAIPPAWEDVWICPHAN
GHVQAVGTDDAGRRQYLYHPDWREKQDELKFERIVEASEVLPDARRRVTRDLRREGMPLE
RACATAVRMLDLGYFRIGHDVYTDLNGSFGLTTLERQHVRSVRGGLRFCFVGKGGITQEL
AIEDEDVTTALRQMRRRRTGSQRVLAYRGDNGWHDLDADEVNAYLAELFDGRLTAKDFRT
WHATVHAAVALASSPEPGDTLASRRRAVKAAVEEVSEFLGNTPTIAKGSYIDPRVIDHYV
EGETVSVPRATGRTPVRRQRAVEAAVRDLLTDEEG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtcagactgcgcaaggtcgcacccgacgacgccgggtggacccgccgacgggccggg
acgggcttcacctatctcgacgaggacggtgaacggttgcccgccgaggaggcccagcgc
ctcaaggcgctggcgatcccacccgcctgggaggacgtgtggatctgcccgcatgccaac
ggccacgtccaggccgtcggcaccgacgacgccgggcgccggcagtatctctatcacccc
gactggcgcgagaagcaggacgagctgaagttcgagcggatcgtggaggcctccgaggtg
ctgccggacgcgcggcgcagggtcacccgcgatctgcggcgagagggcatgccgctcgaa
cgcgcctgcgcgacggcggtccggatgctcgacctgggctacttccgcatcgggcacgac
gtctacaccgatctcaacggctcgttcgggctgaccacgctggagcgtcagcacgtgcga
tcggtccggggcgggctccggttctgcttcgtcggcaagggcgggatcacgcaggagctg
gcgatcgaggacgaggacgtcacgaccgcgctgcgccagatgcggcgccggcgcaccggc
tcccagcgggtgctggcataccgcggggacaacgggtggcacgacctggacgccgacgag
gtcaacgcctatctggccgagctgtttgacggacggctgacggccaaggactttcgcacc
tggcacgccaccgtccacgccgcggtggccctggcgagctcaccggagccgggcgacacg
ctggcctcgcggcgccgggcggtgaaggctgcggtggaggaggtctccgagttcctcggc
aacacacccaccatcgccaagggctcctatatcgacccccgggtcatcgatcactatgtg
gagggcgagacggtctcggtgcccagggccaccgggcgcacccccgtgcgtcggcagcgg
gcggtcgaggctgcggtgcgcgacctgctcacggacgaggagggctga
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