Ornithinimicrobium ciconiae: FNH13_13395
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Entry
FNH13_13395 CDS
T06094
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
orz
Ornithinimicrobium ciconiae
Pathway
orz03030
DNA replication
orz03430
Mismatch repair
orz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
orz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FNH13_13395 (holA)
03430 Mismatch repair
FNH13_13395 (holA)
03440 Homologous recombination
FNH13_13395 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orz03032
]
FNH13_13395 (holA)
03400 DNA repair and recombination proteins [BR:
orz03400
]
FNH13_13395 (holA)
Enzymes [BR:
orz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FNH13_13395 (holA)
DNA replication proteins [BR:
orz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FNH13_13395 (holA)
DNA repair and recombination proteins [BR:
orz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FNH13_13395 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
B12-binding_2
TPR_4
Motif
Other DBs
NCBI-ProteinID:
QDO90410
UniProt:
A0A516GGD7
LinkDB
All DBs
Position
complement(2902350..2903303)
Genome browser
AA seq
317 aa
AA seq
DB search
MLVSGPEQILAERAVDSVLTALRAHDPEVDFVKISAQGYEPGALGVHASPSLFGGWTAIV
VDGFEEADDSLVEDAHALAQDPPDGVTLIVRHKSGNRGKRVLDLLKKNGRVITAPAVKSD
RDKTSFVQQEFRAARRQIEEPAITALVQAVGKDVAELATACAQLVRDTTGRVRAEDVETY
YGDKVETTGFKVADAALRGDTAEALRLLRHALAGGLDPVPIVAVLAMQLRQVGKVASAGR
ASSANLARDLGMAPWQVDQARRTAQGWDGIRLGRAIEAVAAADVDIKGGLRTGTAVARDP
EYAVERAVLAVCRERRG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgctggtgtccgggccggagcagatccttgccgagcgtgcggtggactccgtcctgacc
gcgctgcgggcgcacgaccctgaggtcgacttcgtgaagatctcggcacagggctacgag
ccgggcgcgctcggtgtccacgcgagcccctcgctgttcggcgggtggacagccatcgtg
gtcgacggcttcgaggaggccgacgactcgttggtcgaggatgctcacgcgctggcgcag
gacccgcccgacggagtcaccctgatcgtgcggcacaagagcggcaaccgcggcaagcgg
gtcctggacctgctcaagaagaatggccgggtgatcaccgctcccgccgtcaagtcggac
cgggacaagacctcgttcgtgcagcaggagttccgggcagccaggaggcagatcgaggag
ccggcgatcaccgcgctcgtgcaggcggtcggcaaggatgtcgccgagctggcgaccgcc
tgcgcccagctcgtccgggacaccacgggacgggtgcgcgccgaggacgtcgagacctac
tacggtgacaaggtcgagacgaccggcttcaaggtggcagatgccgcgctgcgcggtgac
acagccgaggcgctgcggctgctgcgccacgctctcgctggcggcctcgacccggtgccg
atcgtggccgtcctggcgatgcagctgcggcaggtcggcaaggtcgccagcgcgggacga
gcgagctcggcgaacctggcccgcgacctggggatggccccgtggcaggtcgaccaggca
cgccgcaccgcgcagggctgggacggcatacggctgggtcgggccatcgaggcggtggcc
gccgcggacgtggacatcaagggtggtctgcgcacggggacggccgtcgccagagacccg
gagtatgccgtggagcgggccgtgctggccgtgtgccgcgaacgccgcggttga
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