Oceanirhabdus seepicola: KDK92_05700
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Entry
KDK92_05700 CDS
T12122
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ose Oceanirhabdus seepicola
Pathway
ose01100
Metabolic pathways
ose01240
Biosynthesis of cofactors
Module
ose_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ose00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
KDK92_05700 (pdxS)
Enzymes [BR:
ose01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
KDK92_05700 (pdxS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
Dus
TetR_C_27
IGPS
NanE
Motif
Other DBs
NCBI-ProteinID:
MCM1989228
UniProt:
A0A9J6NYU4
LinkDB
All DBs
AA seq
289 aa
AA seq
DB search
MANSNLNKNLAQMLKGGVIMDVTNAEQAIIAEKAGACAVMALERVPADIRKEGGVARMSD
PKMIKEIQAAVSIPVMAKVRIGHFVEAQILEAIGIDFIDESEVLTPADEAYHLDKKVYKV
PFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHIRCMMDQMRMVKNAPREELM
TIAKDLNAPFDLIDYVWENGTLPVVNFAAGGVATPADAALMMQLGAEGVFVGSGIFKSGD
PEKRAQAIVKAVTYYNDPKMLAEISEDLGEPMSGLEIDTLENKYAERGW
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcaaatttaaataaaaacttagctcaaatgcttaaaggcggagttattatg
gatgttacaaatgctgaacaagcaataatagctgaaaaagcaggggcttgtgctgttatg
gctcttgagagagttccggcggatataagaaaagagggtggcgtagctaggatgtctgac
cctaagatgattaaagagattcaagcggcagtttctatccctgttatggctaaggttaga
ataggtcactttgttgaggctcagattcttgaagcaataggaattgatttcatagatgag
agtgaagttcttacacctgctgatgaggcttaccatttagataaaaaagtatacaaagtt
ccttttgtatgtggtgcaaggaatcttggagaggcattgagaagaattggagaaggtgct
tcaatgataagaactaaaggtgaagcaggaactggaaatgttgttgaggctgttcgccat
attagatgtatgatggaccaaatgagaatggttaagaatgcaccaagagaagagcttatg
acaattgcaaaagatttaaatgctccttttgatttaattgattatgtttgggaaaatgga
acgcttccagttgtaaattttgctgctggtggagttgctacacctgctgatgcagctcta
atgatgcagttaggggctgaaggtgtatttgttggatcaggaatatttaaatcaggtgat
cctgagaaaagagctcaggctatagttaaagctgtaacttattataatgatccaaaaatg
ctggctgaaatatctgaggatctaggagaaccaatgtcaggtcttgaaatagatacatta
gaaaataagtatgccgaaagaggatggtag
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