Oceanicoccus sagamiensis: BST96_00640
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Entry
BST96_00640 CDS
T04832
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
osg
Oceanicoccus sagamiensis
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osg03016
]
BST96_00640
Enzymes [BR:
osg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BST96_00640
Transfer RNA biogenesis [BR:
osg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BST96_00640
Prokaryotic type
BST96_00640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ARN72748
UniProt:
A0A1X9N3H7
LinkDB
All DBs
Position
complement(155156..156196)
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AA seq
346 aa
AA seq
DB search
MTELLLTPLPYAYSEQPSLTGVLRRQPEDFIVEEILGFEPEGEGEHVFLWIEKTGLNTQQ
VADRIARLAKLPARQISYSGMKDRNAVTRQWFSVHLPGNKELDWQQLADTQVKVLKAVRH
LRKLRRGVHKANRFSLRVTELEGDTTGLEQTLDNIAQQGVPNYFGEQRFGFDGANLIKAQ
QLFAGSFKAKRHQRGIYLSAARAYLFNQLLARRVSAQNWNSLLGGELLMLAGSHSVFLQH
DEEDLEQRLSTADIHLTGPMYGKASSLGCEGEVAELERSILSAYPELLDGLEQEGLKAER
RSLRSVAQNISWHIDKQQIELSFSLDSGCFATAVVRELVNYKTYRH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgactgagttgttattaacgccactcccctatgcctatagtgagcagccttccctaaca
ggggtgctacgccggcagccggaagattttatcgtcgaagaaatactgggctttgaaccg
gaaggtgagggtgaacatgtttttttatggatagaaaaaaccggcttaaatacccagcaa
gtggcggacagaatcgccagactggccaaactaccggcgcgccaaatcagttactccgga
atgaaagatcgcaatgcggttacccgccaatggtttagtgtgcacctgcccggtaataaa
gaacttgattggcagcaattggcagatactcaagttaaggtattaaaagccgtacgtcac
ctgagaaaattacgcagaggtgtgcataaggctaaccgctttagccttcgagtgactgag
cttgagggggataccaccgggttagagcagacgctggataatatcgctcagcagggggtc
cccaattattttggcgaacagcgtttcggttttgatggtgcaaacctgattaaagcccag
cagctgtttgctggtagctttaaagccaaacggcatcagcggggcatctatctatccgcc
gcccgggcctacttatttaaccagttattggcccgtcgcgtcagcgcacaaaactggaat
agtctgttagggggtgagttgctgatgttggctggctctcatagtgtctttttgcagcat
gacgaagaggatttagagcagcgtttatccaccgccgacatccacttgaccggcccgatg
tacggcaaggcatccagtcttggttgtgagggtgaggttgccgaattggagcgcagtata
ctgtcggcgtatcctgaattactggatggcttagagcaggagggtttaaaagccgagcgt
cgttccctgcgttcagtcgcgcaaaatataagctggcatatcgataagcaacagattgag
ttaagtttctcactagacagtggctgtttcgcgaccgcagttgtgcgagaattagtaaac
tataagacctatcgccattaa
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