Oceanicoccus sagamiensis: BST96_02065
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Entry
BST96_02065 CDS
T04832
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
osg
Oceanicoccus sagamiensis
Pathway
osg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BST96_02065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osg03019
]
BST96_02065
03016 Transfer RNA biogenesis [BR:
osg03016
]
BST96_02065
Enzymes [BR:
osg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BST96_02065
Messenger RNA biogenesis [BR:
osg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BST96_02065
Transfer RNA biogenesis [BR:
osg03016
]
Prokaryotic type
tRNA degradation factors
BST96_02065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
ARN72998
UniProt:
A0A1X9N4B3
LinkDB
All DBs
Position
complement(450533..452653)
Genome browser
AA seq
706 aa
AA seq
DB search
MNPVKKSFQFGEHTVTLETGRIARQATGAVLVSMGDVQVLCTVVAAKSAKEGMDFFPLGV
HYQEKAYAVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPNGFKNEVQVVCTVMSAD
TETDPDIAALIGTSAALSISGVPFNGPVGAARVGFTAEQGYILNPSYSQLAESSLDMVVA
GTSDAVLMVESEAQELSEDQMLGAVLYAHQEMQAVVKVVAELAAEVGKPRWDWQPEEENT
ALLAAVATGFKQGVGDAYRVTDKAERYSKLGDLKSQAIEQLASGDDAEYAAGDVQDVFKS
LEKNTVRQRILNGEARIDGRDSSTVRPINVEVGVLDKAHGSALFTRGETQAIGVTTLGTT
RDAQLIDALEGKREDNFMLHYNFPPYSVGECGRIGFTSRREVGHGRLARRGVAAVLPNAE
DFPYTIRVVSEITESNGSSSMASACVASLSMMEAGVPLKAPVAGIAMGLVKEGERFAVLT
DILGDEDHLGDMDFKVAGTADGITALQMDIKIEGINEQIMSIALEQALEARLHILGQMNQ
VLSESRTTVSDNAPSMATFKIDSDKIRDVIGKGGATIRSITEETGATVDIDDDGTIRIYG
SDAASRDAAVAKVEEITAEAEVGAIYEGTVARIVDFGAFVNILPGKDGLVHISQISQERV
EKVTDYLSEGQVIKVKVLDVDQRGRIKLSMKELEEAAPAADDSAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaaaaaaatcatttcaattcggtgagcacaccgtaactctagaaacaggc
cgtattgctcgtcaagctacaggtgccgtattggtatctatgggcgacgtacaggtactt
tgtactgtggtagccgccaagtcagccaaagaaggtatggacttttttccactaggtgtt
cattaccaggaaaaagcttatgcagttggtaagattcccggtggtttcttcaagcgtgaa
gcgcgtccttctgaaaaagaaacgctaacctcacgtttaattgaccgtccaattcgtccg
ttattccctaacggttttaaaaatgaagtacaggttgtttgtacggttatgtctgcggat
actgagactgatccagatatcgcagctttgatcggtacttctgccgcactctctatctct
ggtgtaccgtttaatggcccagtgggtgcagcccgtgttggttttaccgctgagcaaggt
tatatccttaacccaagctacagccagttggccgaaagctctttggatatggttgttgct
ggtaccagcgatgccgtattaatggttgaatcagaagctcaagagctaagcgaagaccag
atgctgggtgcggtactttacgcccaccaagaaatgcaggctgttgttaaagtggttgct
gaattagccgctgaagttggcaagccccgttgggattggcagccagaagaagaaaatact
gcgctattggccgctgttgccacaggctttaagcagggcgttggtgatgcttaccgcgta
actgataaagctgagcgttatagcaagctgggcgatcttaagtctcaagcgattgagcag
ctagcctctggtgatgacgctgaatatgccgcaggcgatgttcaggatgttttcaagagc
ttggaaaaaaatactgttcgccagcgtatccttaatggtgaagcgcgtatcgatggtcgt
gatagcagcaccgttcgccccatcaacgttgaagtgggtgttttggataaggcacacggt
tcagcactatttactcgtggtgaaactcaggcgattggtgtgaccactttagggactacc
cgtgacgcacagttaatcgacgcccttgaaggtaagcgcgaagataactttatgttgcac
tataacttccctccttattcagtgggtgagtgtggtcgtatcggttttaccagccgtcgt
gaagttggtcatggtcgtttggcccgtcgtggtgttgccgcggttctgcctaatgccgaa
gacttcccatacactatccgcgtagtttcagaaattactgaatctaacggttcaagctct
atggccagtgcctgtgttgccagcttgtcgatgatggaagcgggtgtaccgttgaaagcg
cctgttgctggtatcgccatgggtctggttaaagaaggcgagcgttttgctgtattgacc
gatatcctgggtgatgaagatcacttgggtgatatggactttaaagtggctggtactgcc
gatggtattactgccctgcaaatggatatcaaaattgaaggtatcaatgagcaaatcatg
agcatcgctttagagcaagctcttgaagcgcgtctacatatccttggtcagatgaatcag
gtactgagcgagtctcgcactaccgtatctgacaacgctccaagcatggctaccttcaaa
atcgacagcgataaaatccgcgatgttattggtaaaggcggtgcaactatccgctcaatt
actgaagaaactggcgcgaccgttgatatcgatgatgacggtactatccgtatttatggt
tctgatgctgcgtcccgtgacgctgcggtagctaaagtagaagaaattactgctgaagct
gaagtcggtgctatttacgaaggtacggttgcccgtatcgttgattttggtgcctttgtt
aatatcctgccgggtaaagacggtctggtacacatctcacaaatctctcaggagcgtgtt
gagaaagtgaccgactacttatcagaaggtcaggttattaaagttaaagtactggacgtt
gaccaacgcggtcgtattaagctgtctatgaaagaattggaagaagcggcacctgctgct
gacgattctgctgcagagtaa
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