Oceanicoccus sagamiensis: BST96_02075
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Entry
BST96_02075 CDS
T04832
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
osg
Oceanicoccus sagamiensis
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
osg03016
]
BST96_02075
Enzymes [BR:
osg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BST96_02075
Transfer RNA biogenesis [BR:
osg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BST96_02075
Prokaryotic type
BST96_02075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ARN73000
UniProt:
A0A1X9N4C2
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All DBs
Position
complement(453236..454195)
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AA seq
319 aa
AA seq
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MAKKRRGRPVDGVLIVDKPTGQSSNRSLQIAKRLFFAQKAGHTGSLDPLATGVLPVCFGE
ATKFSQFLLDSDKAYRSTFLFGVITASGDADGDVLEQRDATAVREACVLALLPKFLGEIE
QIPSMFSALKHQGQPLYKLARQGLEVERKVRQVTIFDIRLDAFRSAEETGGQPEADVYIH
CSKGTYVRSIAEDLGLELGCGAHVKKLHRVQAGPFAEAQAVSIAKLEALAEKVEVEGYDA
LDALLEPADAAVMHLSEVTLAESAVFYMLRGHAVSVAVIPANCEPGDIVRMYSESRDFIG
IGEVLDGGQVGPKRLIATN
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaagcgtcgtggcaggccggttgatggcgtcttaatcgtcgacaagccaaca
ggtcaaagctcaaaccgatcgctgcaaattgccaagcgattgttctttgcccaaaaggcg
ggacataccggcagtttggatccattggctaccggtgtattgccggtgtgctttggtgag
gctaccaagttttcccagtttttactggattcggataaggcgtaccgtagtaccttttta
ttcggagtgataaccgccagcggcgatgctgatggcgatgtgttagagcagcgcgatgcc
actgcggtacgcgaagcttgcgtactggcactgctacccaaatttttgggcgagatagaa
caaataccttcgatgttttcagcattaaaacatcagggtcagccgctctataaattagcg
cggcaagggttagaagtagagcgaaaggttcgtcaggtaacgatttttgatattcgttta
gacgcttttcgcagtgcagaggaaaccggtggtcagccggaagccgatgtgtatatccac
tgtagcaagggcacctatgtgcgttctattgcagaggacttaggtttagagctgggttgt
ggtgctcatgttaaaaagctgcaccgagtgcaagcgggcccttttgctgaggctcaggct
gtttcaattgcaaaacttgaggcgctggcggaaaaggttgaggtcgaaggttatgatgcc
ttggatgctttgttagaaccggctgatgcagcggttatgcatctgtcagaggtgaccttg
gcagagtctgcggtattttatatgctgcgaggtcatgcggtttcagtcgcggtaataccc
gccaactgtgaacccggtgacatagtaagaatgtactctgagtcgagagattttatcggc
attggagaagtgttagacggaggccaggttgggcccaaacgtctgatagcgaccaactag
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