Oceanicoccus sagamiensis: BST96_05750
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Entry
BST96_05750 CDS
T04832
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
osg
Oceanicoccus sagamiensis
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osg03009
]
BST96_05750
Enzymes [BR:
osg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BST96_05750
Ribosome biogenesis [BR:
osg03009
]
Prokaryotic type
rRNA helicases
BST96_05750
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GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ARN73666
UniProt:
A0A1X9N7K0
LinkDB
All DBs
Position
complement(1275287..1276669)
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AA seq
460 aa
AA seq
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MTDNAFSTLNLPAAQLDNLQQLGYQAMTSIQQQSLPLVLEGKDLIAKAKTGSGKTAAFAI
GMLTNINPRDFGAQALVLCPTRELSTQVATEIRRLARYQQNIKVVVLCGGQSIGPQIGSL
EHGAHIIVGTPGRIKDHLRKKTLSLARINTLVLDEADRMLDMGFYEDMEIIIGETPEQRQ
TLLFSATYPKKIKSLSAAFQREPVEVTVESIHSNAHIKQALYITSKDNKLYGLERILANY
DVQSAVIFCNTIKVVKEVCEYLCQQGFSAKALHGDLEQRDRDQILVQFSHRSCSLLVATD
VAARGLDIDDLEAVINFDLPRDPEIYIHRIGRTGRAGKEGLALAVFSDSEKYKVDAIAEY
QAMPLDFEAIETLNSDKDAITEPPMVSLCIGGGRKEKVRPGDILGALTGDAGIQGKAVGK
ITVLDHVAYVAIERDVARQALKRLEQGKIKGRKFKVRRLR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgataatgcattctcaaccctgaacctgcccgctgcccagttggataacctgcaa
cagctgggttatcaggcaatgacctccatccagcagcaaagcttacctttggtgttagaa
ggtaaagaccttatcgccaaggccaaaaccggtagcggtaaaaccgccgcttttgccatt
ggtatgctgaccaacattaaccccagagattttggtgctcaggcactggtactgtgccca
acccgggagcttagcacccaggtggctaccgagattcgcaggctggcccgttatcagcaa
aatattaaagtcgtggtcttatgtggtggtcagtctatcggtccgcagattggttcattg
gaacacggtgcccatattattgttggaaccccaggtagaattaaagatcatttgcgcaaa
aaaaccttatctctggcccgtattaatacactggtgctagatgaagctgaccgcatgctg
gatatgggtttttatgaggatatggagattattattggggagacaccagagcagcgccag
acgctgttattttccgccacctatccaaaaaaaataaaatcactcagtgcggcctttcag
cgcgagccagtagaagtcacggtagagtctattcatagcaatgctcatatcaaacaggcc
ctatatatcaccagcaaagacaacaagctctatggcttagagcgcatactggccaactat
gacgttcagtccgcggtgatattttgcaataccatcaaagtagttaaggaagtctgtgaa
tatttatgccagcagggttttagtgccaaagcattacacggtgatttggaacagcgtgac
cgtgaccagatcttggtgcagttttcccatcgcagttgctcgttgttagtggctactgat
gttgcagccagaggtctggatatcgatgaccttgaggcggtgattaattttgatttgccc
cgcgaccctgaaatttatattcaccgcatagggcgcaccggcagagcgggcaaagagggt
ttagcgctggccgtattttctgattcagagaaatacaaagttgatgctattgccgagtat
caggcgatgccgctggattttgaagctattgaaactctgaatagcgataaggatgcgatc
acagagccgccgatggtgagcttatgtattggcggcggccgcaaagaaaaagttcggccc
ggagatattttaggggcgttgactggtgatgccggtatccagggtaaggcagtgggtaaa
ataaccgtgctggaccatgtggcctatgtggctattgagcgtgatgtagcgcgccaggcc
ctaaaacggttggagcaaggcaagatcaaagggcgaaagtttaaagtccggcgcttacgt
tag
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