Oceanicoccus sagamiensis: BST96_09840
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Entry
BST96_09840 CDS
T04832
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
osg
Oceanicoccus sagamiensis
Pathway
osg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BST96_09840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osg03400
]
BST96_09840
Enzymes [BR:
osg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BST96_09840
DNA repair and recombination proteins [BR:
osg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BST96_09840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
AAA_19
Flavi_DEAD
AAA_22
TrwB_AAD_bind
Zn_ribbon_6
AAA_11
PIF1
HypA
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
ARN74398
UniProt:
A0A1X9N8K1
LinkDB
All DBs
Position
complement(2159826..2162024)
Genome browser
AA seq
732 aa
AA seq
DB search
MPILTLAMPTPLRRSFDYLPPEAMDDETVAALPAGVRIEAPFGNRKLIGILLATKASTDI
DPSKIKRVTKVLDQHPILTDKLLSLSQWAASYYQHPLGDAFANAIPNLLRKGEALIPQTQ
SHWQLTTEGKGLPEGALKRAAKQAQLLGLLQQQGRLNRVQLDNAAISQATCKALIEKGLI
ERVEVLAEPYDHQQDCLKSPHLKLNHEQKRAVDTIHANTGFQCYLLEGVTGSGKTEVYLQ
LIEQCLKRQQQALVLIPEIGLTPQTLSRFNNRFNCPIVTLHSGLTDRERLLAWQHAQSGE
AGIILGTRSAVFTATANLGLVIIDEEHDSSFKQQDGFRYSARDIAIKRAADEQCPIVLGS
ATPSLETLNNALQGRYHHLPLKSRATGASAPAFELLDIRHAPMEDGFSPALISAIGNEIK
RGNQVLVFINRRGFSPMLMCHDCGYVAQCQLCDARMTVHFQQRLLRCHHCESQAALPHQC
PECNGTQLDFRGSGTERSEQALKRLFPSTDIKRIDRDTTSRKQAMQQLVAEVHKGEPCIL
VGTQMLAKGHHFPDVTLVAVLDADGGLFSADFRGPEKMGQLLVQVAGRAGREAKAGKVII
QTHQPEHPLITSLVNDSYHHYARAILSERQASGLPPFAHLALLRAEANNLEQAEALLQDL
RGWVDHSGCQVFGPLPAPMTRKAGRFRAQLLIRADQRKPLHRTLQQLCSLAEQHPLANKV
RWSIDVDPSDMF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccatacttaccctggccatgcccacaccactgcgtcgcagctttgactacctgccg
ccagaggctatggatgacgaaaccgtggcggccttgccagcaggcgtgcgcattgaagcc
ccctttggcaaccgcaagcttattggcattctattagccaccaaagcaagcaccgatatc
gaccccagcaagatcaagcgagtcaccaaagtgctggatcagcaccctatactgacggat
aaactactctcactaagccagtgggcggccagctattaccaacacccattgggtgatgcc
tttgccaatgccatcccaaacctgctgcgcaaaggcgaagcgttaatcccccaaacgcag
agccactggcaacttaccaccgaaggcaaaggcctgcccgaaggcgcactgaagcgagca
gccaaacaagcgcagctattggggttactacagcagcaaggccgccttaatcgagtacaa
ctggataatgcggctattagtcaggcaacctgcaaagccctgatcgaaaaggggctgatt
gaacgggttgaggtgctggcagagccctatgaccaccaacaagactgcttaaaatctccc
cacctgaagctcaaccacgagcaaaaaagggcggtagataccatccacgccaacacaggg
tttcaatgctatttactggaaggggttaccggcagcggcaagaccgaagtctatctgcaa
ctgattgagcaatgccttaaacggcagcaacaggcgctggtgcttatccccgaaattggt
ttaacaccacagacactgagccgctttaacaatcgctttaactgccctattgtcacactg
cactcaggtcttactgatcgggagcgcttactagcatggcagcatgcgcaatccggcgag
gccggtattattctcggtacacgctcagcggtatttaccgcgactgccaatttagggctg
gttattatcgacgaagagcatgatagctcctttaaacagcaggatggctttcgctattcc
gccagagatattgctattaaacgggccgccgatgagcagtgccccatcgtattaggctca
gccacgccaagcctcgaaaccctcaataatgccctgcaaggtcgctaccatcatctgcca
ttaaagtcgcgagccactggggcaagcgcccccgcattcgagctactggatattcgccac
gctccgatggaagatggctttagccctgccctgattagcgccattggcaatgagatcaaa
cgtggcaatcaggtcctggtctttattaaccgccgtggcttttccccaatgctaatgtgc
cacgactgcggctatgtggcccaatgccagctctgcgacgccagaatgacagtacatttc
cagcagcggctgttgcgctgtcatcactgcgaaagccaggctgccctgccccatcaatgc
ccggagtgtaacggcacacaattagactttcgcggctcaggcaccgagcgcagcgaacaa
gccctaaaacgcctgttcccatccaccgatatcaagcgcatcgaccgcgataccacctcc
cgtaagcaggcgatgcaacaactggttgccgaggtacataagggggagccctgtatcctg
gtgggcacccagatgctggccaagggccaccacttccccgatgtcaccttagttgccgtg
ctggatgccgacggcggcttatttagcgccgattttcgcggcccggaaaaaatgggacag
ctattagtacaggtcgccggcagagcgggccgggaagccaaagccggtaaagtcatcatc
cagacccaccaacccgagcaccccctgattaccagcctggtcaatgacagctatcatcac
tatgccagagccatactcagtgaacgccaggccagcggcctgccaccctttgctcacctt
gcgctgctgcgagccgaggctaataacctcgaacaagccgaagccctattgcaggacctg
agaggctgggtagaccacagcggctgtcaggtatttgggccactgcctgcacccatgaca
cgaaaggccggccggttcagagctcagctgttaattcgcgccgaccagcgcaaaccctta
caccgcaccctgcaacaactctgctcactggcagaacaacaccctttagccaataaagtc
cgctggtcaatcgatgtcgaccccagcgatatgttttaa
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