Oceanicoccus sagamiensis: BST96_10335
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Entry
BST96_10335 CDS
T04832
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
osg
Oceanicoccus sagamiensis
Pathway
osg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BST96_10335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osg03021
]
BST96_10335
03400 DNA repair and recombination proteins [BR:
osg03400
]
BST96_10335
Enzymes [BR:
osg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BST96_10335
Transcription machinery [BR:
osg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BST96_10335
DNA repair and recombination proteins [BR:
osg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BST96_10335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ARN74479
UniProt:
A0A1X9NG52
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All DBs
Position
2263811..2264815
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AA seq
334 aa
AA seq
DB search
MQSAVNEFLTPRVIDVDEVSSTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSAIEGVQEDVIEILLNLKGVSILMHGKDEAVLTLSKSGAGPVTAGDIQVDHE
IEISNPDHVIANLNEAGSLNMKLTIGRGRGYIPADARQNDEEETRSIGRLQLDASFSPVH
RVAYVVENARVEQRTDLDKLVLDLETNGTIDPEEAIRRAATILQQQLSVFVDLESEKEAE
PEEEEDEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGLRLDNWPPASLKNDDKLLAS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcagtaaacgaatttttaacgccacgcgttatcgatgtagacgaagtaagc
tcaacccgcgccaaggtaactcttgagccattagagcgtggctttggtcatactttaggt
aatgccttgcgtcgtattctgttgtcttccatgcccggttgtgccgtgactgaagttgag
atcgacggcgtgttgcatgagtacagtgctattgaaggtgttcaggaagatgtgattgaa
atcttgttgaacctgaagggtgtatcaattttgatgcacggaaaagacgaagccgtatta
accttaagcaagtctggcgcaggtcctgtgacagctggcgatatccaggttgatcacgaa
attgaaatttctaaccctgatcatgtgattgccaacttaaacgaagctggttcattaaac
atgaagctaaccatcggccgcggccgtggttatattcctgcggatgctcgtcaaaatgac
gaagaagaaactcgcagcattggtcgtttacagttagacgcttctttcagcccagtacac
cgcgtcgcttacgtggtagaaaacgctcgtgtagaacagcgtactgaccttgataaactg
gttctggatcttgagaccaacggtactatcgatcctgaagaagcgattcgtcgtgcagca
accatcttacagcagcagctgtcagtatttgttgaccttgaaagtgaaaaagaagctgag
ccagaggaagaggaagacgaagtcgatccaattctactgcgtccggttgatgatcttgag
ttaactgtacgttcagccaactgtctgaaagcagaaaatatttactacattggtgacctt
gttcagcgcacagaagttgagctgctgaaaacccctaacttgggtaagaagtcactgaca
gaaattaaagacgttttggcgtcacgtggtttgtctttaggtttacgcctggacaattgg
ccacctgccagccttaaaaacgatgacaagctgttagcttcttaa
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