Oceanicoccus sagamiensis: BST96_13285
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Entry
BST96_13285 CDS
T04832
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
osg
Oceanicoccus sagamiensis
Pathway
osg03030
DNA replication
osg03430
Mismatch repair
osg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BST96_13285
03430 Mismatch repair
BST96_13285
03440 Homologous recombination
BST96_13285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osg03032
]
BST96_13285
03400 DNA repair and recombination proteins [BR:
osg03400
]
BST96_13285
Enzymes [BR:
osg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BST96_13285
DNA replication proteins [BR:
osg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BST96_13285
DNA repair and recombination proteins [BR:
osg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BST96_13285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
SSB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ARN75001
UniProt:
A0A1X9NCW7
LinkDB
All DBs
Position
2874560..2878171
Genome browser
AA seq
1203 aa
AA seq
DB search
MSASFVHLRLHSEFSLIDGLVRIKPMVKQVAELGMPAVALTDHTNFYALIKFYKAAIGAG
VKPIYGSDFHLVDDNDETQISTLCLLAQNNQGYRNLTELISRAYQEGQHLGVPYIKSSWL
AEYADGLIALSGGRKGEVGQALLASRHDMARQRLGELMALFPNRFYLELQRTGREYEEDY
LHAAVELAAELDCPVVATNEVCFLTASDFEAHETRVCIHDGRALDDPRRNRGYSDQQYLR
TPEEMQALFSDIPEALANTVEVAKRCNVEISLGTYYLPEYPIPEDFESDPFFKIESYDGL
KQQTEKSLKAKWEGKEDTPEYAKELITGIFFRKISIEGLNERLDFLFGEQAKEQAPTYRE
RLDFELDIILEMGFPGYFLIVMDFIQWSKDHDIPVGPGRGSGAGSLVAYAQKITDLDPLE
YDLLFERFLNPERVSMPDFDVDFCMDNRDQVISYVADNYGRDAVSQIITFGTMAAKAVVR
DVARAQGKSYGLADKLSKMIPFEVGMTLQKGFEQEEVLRDFLRDDEQAQEIWDMALQLEG
VTRNVGKHAGGVVIAPSKLTDFAPLYCDESGSGLVTQFDKNDVEEAGLVKFDFLGLRTLT
IIDWALKMINRPKDDGSSVNVEIERIPLDDPASYQLLKRAETTAVFQLESRGMKDLIKRL
QPDNLEDMIALVALFRPGPLDSGMVDDFVNRKHGRAEVAYPDAQYQHEWLKPILEPTYGV
IVYQEQVMQIAQELAGYSLGGADMLRRAMGKKKPEEMAKQRQTFEEGAKSKGVDPTLAIK
IFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPAEFMAATMSSELQNTDKIVIFIEE
CRAMKLDYRLPDVNEGEYMFTVNKEGAIVYGLGAIKGLGEGPIENIIAAREEGGPFNNLF
DFCERTDPRKVNKRAIEALIRSGSFDTLGVERAVLLSAMPEAVKAAEQSAGNRDAGMMDL
FGEVVQADDSGDVYADHHKVRPLTPKEKLGGEKDTLGLYVTGHPIDEYEKELRQFVRNRI
VDLKADFNNQTMAGLVVDLRTMKNKRGDTMAFLTLDDRSARIEISLFSEAFELAREKISK
GAILVVEGKVSFDDYSGQLKVRGSTVRTLLDARQSNVKALELTLQTADFNGINGSNGFSN
EFKRLLEPSRLNGRCPVFIDYQRDGAKGQVRLGSEWQIQPSDELIQRLKDRFGDNSVRLN
FGE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctctttcgtccatctccgcctgcacagtgaattttcattgattgatggcctg
gttcgtatcaagccaatggtcaaacaggtggcggagttaggcatgcctgcggtggcgctc
accgaccataccaatttctatgccctgatcaaattttataaagccgccattggagccggt
gttaagccaatctatggcagtgattttcatctggtggacgataatgatgaaacccagatc
agcaccttgtgtttgctggcacagaataatcaaggctatcgcaacctcaccgagttaatc
tccagagcctaccaggaaggtcagcatctgggtgtgccctatattaaaagctcctggttg
gctgaatatgcggatggtttgattgccctctcaggggggcgtaaaggtgaggtagggcaa
gctttattggcctcaaggcatgacatggccagacagcgccttggcgagttaatggccttg
tttcccaaccgtttttatcttgagctacagcgaacgggccgtgaatacgaagaagactat
ttacatgcggcggtagagttggcggcggagctggattgccctgtggttgctactaacgag
gtttgctttttaaccgccagtgattttgaagcccatgaaacccgcgtctgcattcacgat
ggcagagctttggatgaccctcgtcgcaaccgcggctatagtgaccagcagtacctgcgc
acgccggaagaaatgcaggcgttgtttagtgatattcccgaggctctggccaataccgtg
gaagttgccaagcgctgtaatgtagaaatttctctgggtacttattatttaccggagtac
cccattcccgaagattttgaaagtgatccctttttcaaaattgaatcctatgacggcctg
aaacaacaaacagagaagtctttaaaagccaagtgggagggtaaggaagatacccccgag
tatgccaaggaattaattaccggcatcttttttagaaaaatttctattgaaggcttaaac
gaacggctggatttcttatttggtgaacaggcgaaagaacaggcgcctacctaccgggaa
cgactggattttgaactcgatattattctggaaatgggttttccgggttacttccttatc
gttatggactttattcaatggtcaaaagaccacgatattcccgtcggccccgggcgaggt
tccggtgccggttcactggtggcctatgcccagaaaattactgaccttgatccgttggaa
tacgacctgttatttgagcgctttctaaacccggaacgtgtttccatgccggatttcgat
gttgatttctgtatggataaccgcgaccaggtgattagctacgtggcggataactatggc
cgtgatgccgtaagccagattattacctttggtaccatggccgcaaaagcggtggtgcgt
gatgtagcccgtgcccagggtaagtcctatggcctggcggacaaactctcaaaaatgatc
ccttttgaagttggcatgaccttgcaaaaaggttttgagcaggaagaagtcttaagggac
tttctacgcgatgatgagcaggctcaggaaatctgggatatggcgctgcaactggaaggt
gttacccgaaatgtgggtaagcacgccggtggtgtggttatcgcgccctcaaagctgaca
gactttgccccgctttattgcgatgaaagcggtagtggtttggtcacccagttcgataaa
aacgatgtagaagaggccggtctggttaagttcgacttcctgggtttgcgtaccctgacc
atcatcgactgggcgttaaaaatgatcaaccgcccgaaagacgatggcagttcggtgaat
gtcgaaatagagcgcattcccctcgatgaccccgcgtcttatcagttgttgaaacgtgca
gaaaccaccgcggtattccagctggaatcccgggggatgaaagacctgatcaaacgcctg
caaccggataatctcgaagatatgatcgcgttggtggcgttatttcgtcccgggccgctc
gattcagggatggtggatgactttgttaaccgtaagcacggccgcgccgaagtggcctac
ccggatgcccaataccagcatgagtggctaaaaccgattcttgagcctacctacggcgtt
attgtttaccaggaacaggttatgcaaatcgcccaggaattggcgggctatagtctgggc
ggtgcagatatgttgcgccgggccatgggtaagaaaaaacctgaagaaatggccaagcag
cggcagacctttgaagagggtgcgaaaagcaaaggggttgatccaaccctggcgatcaaa
atctttgatctggtggaaaaatttgccggttatggttttaataaatcccactccgcagcg
tatgccttggtgtcctaccagaccgcctggctaaaagcccattaccccgctgagtttatg
gcggccaccatgagctcggaattacaaaacaccgataaaatcgttatctttattgaagaa
tgccgggcgatgaaactggactatcgcctgccggacgtgaatgaaggcgagtatatgttt
accgtgaacaaggagggggcgattgtttacggtctgggggcgattaaaggtttgggtgaa
ggcccaatagaaaatattattgccgcccgggaagagggtggcccgtttaacaacctgttt
gatttctgtgagcgtaccgacccgcgcaaagtgaataagcgtgcgattgaagccctgata
cgttccggctcctttgataccctgggtgttgaaagggccgtattgctgtccgctatgccc
gaagcggtaaaagcggctgagcaaagtgccggtaaccgcgatgcggggatgatggattta
tttggcgaagtggtacaggctgatgatagcggtgatgtctatgccgaccatcataaagtc
aggccgctcacccccaaagaaaaactcggtggcgagaaagatacgctgggcctttatgtt
accggccacccgattgatgaatatgagaaagagttgcgccagtttgtgcgcaatcgcatt
gttgatttaaaagccgattttaataaccagaccatggctggcctggtggtcgatttacgc
accatgaaaaacaagcgcggcgataccatggcgtttctaactctggatgaccgttcggcc
cgtattgaaatcagcttattttcagaggcctttgagctagccagagaaaaaatcagcaaa
ggtgccatcctggtggtagaaggcaaggtcagctttgatgattattctggacagcttaag
gtgcgcggcagcaccgtaagaactctgttagacgctcgtcagtcgaatgtgaaggcgctg
gagctgaccttgcaaaccgccgactttaacggcatcaatggcagcaacggctttagcaat
gagtttaagcgcttattggagccgagccgtttaaatggccgctgcccggtatttatcgat
taccagcgcgatggcgccaaaggccaggtcaggctgggcagtgaatggcagatccaaccc
agtgatgagcttattcaacgtttaaaagaccggtttggggacaatagcgtccgcctgaac
tttggcgagtaa
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