Oceanicoccus sagamiensis: BST96_13930
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Entry
BST96_13930 CDS
T04832
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
osg
Oceanicoccus sagamiensis
Pathway
osg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
osg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BST96_13930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
osg02000
]
BST96_13930
Transporters [BR:
osg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BST96_13930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ARN75117
UniProt:
A0A1X9NJR9
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All DBs
Position
3015817..3017097
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AA seq
426 aa
AA seq
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MSQFSSKPLSRRRFLNRSIKGAGLGVAAVNAPYIMSKEKTTLRIMGTHVTLQEEIRQQAM
ADLGIKLVFEARGEAELVQKATTRPDQFDLYEQWTDSIKTLWQADAIQPIETSRLRYWDE
INNISKQGRIVPEAPIGLGDAPYKILNIQEDGGLGAEHTGKISFLPYVHNVDSFGYNTDV
VPKGVPYETESWGWLLDERWQGKVGVVNAPTIGIFDLALAAEAKGLMTFADISNMTIAEL
DKLFSILIDFKKRNHFAGFWNTVPQSVDFMTSGRVVIESMFSPGVSSANGRGTPVTYAAP
KEGYRAWHGVMCMSRECKGEVRDAAYDYMNWWLSGWPGAFIARQGYYISNPERSRPLLSQ
QEWDYWYDGKPAATELRGTDGKVSVAKGDIRTGGSYVNRFSNVAVWNTVMDNYDYSLQRW
YEFLLA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttctctagcaaaccattaagccgtcgacgttttttaaatcgctctattaaa
ggggctggccttggtgtggccgcggtgaatgcgccctatattatgtcaaaagaaaaaacc
acgctgcgtattatgggtacccatgtcaccttgcaggaagaaattcgccagcaggctatg
gccgacctcggtattaagctggtatttgaagccagaggagaagcggagctggtgcaaaag
gcaaccactcgccccgatcaatttgatctctatgaacagtggaccgatagcattaaaacc
ctatggcaggccgatgccattcaaccgatagaaaccagtcggctgcgttactgggatgag
attaataatatttccaagcaggggcggatagtccccgaagcgccgattggtttaggtgat
gcaccttataagatattgaatatccaggaggatggtgggctgggtgccgagcataccggg
aagattagttttttgccctatgtgcataatgtcgattcatttggttacaacaccgatgtt
gttcccaaaggcgtgccctacgaaacagaaagttggggctggttattggatgagcgctgg
cagggcaaggtgggagtggttaatgcaccgaccattggtatttttgatcttgcactggca
gctgaggccaaaggcttaatgacctttgccgatattagcaatatgacgattgccgaattg
gataagctatttagtattttgattgattttaaaaagcgcaatcactttgccgggttttgg
aataccgtgccacagtcggtagattttatgaccagtggccgggtggttatcgaaagcatg
ttctcaccgggtgtttcctctgccaatggccgtggcacgccagtgacctatgccgccccc
aaagaaggttaccgggcctggcatggggtgatgtgtatgtcgcgggagtgcaaaggtgag
gtgcgcgatgcggcctatgattatatgaattggtggctcagtggttggcctggggcgttt
attgctcgtcagggctattatatttctaatcctgagcgctcgcggcccttattaagccag
caggaatgggattactggtatgacggcaaacccgccgccacagagcttaggggcaccgat
ggtaaagtctccgttgccaaaggggatattcgcaccggcggctcctatgtgaatcgcttt
agcaatgtcgccgtctggaacaccgtaatggataactacgattattcattgcaacgctgg
tatgagtttcttcttgcatga
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