Oenococcus sicerae: DLJ48_00705
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Entry
DLJ48_00705 CDS
T05833
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
osi
Oenococcus sicerae
Brite
KEGG Orthology (KO) [BR:
osi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osi03019
]
DLJ48_00705
03009 Ribosome biogenesis [BR:
osi03009
]
DLJ48_00705
Enzymes [BR:
osi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DLJ48_00705
Messenger RNA biogenesis [BR:
osi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DLJ48_00705
Ribosome biogenesis [BR:
osi03009
]
Prokaryotic type
rRNA helicases
DLJ48_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MGS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QAS69147
UniProt:
A0AAJ1R9W6
LinkDB
All DBs
Position
complement(121430..122794)
Genome browser
AA seq
454 aa
AA seq
DB search
MTNQFGQFNLKANIIKAIDGIGFVKPTKIQQRLIPAVIAGRDVVGQSQTGSGKTHVFLLA
IFNALDPSVNEVQAVITSPSRELAEQLYEAFRDFQKSLSEIDKNFSNLRIANYVGGTDRH
KQTKQLEKNQPQVVIGTPGRLKDFLGQNLLLVNHNKFFVVDEADMALDMGFLTDVNIIAS
AMPSDLQMLVFSATIPDKLTPFLKKYMKEPLIEEIPVSTVVADTIDNYLLATKSKNKNEV
IYDLLTRGETYLSLVFANTKERVHEIAKFLTAQGLKVAEVHGGIEPRERRRTMRRIKNQE
FQYVVASDLASRGLDIEGVSEVINDDIPVDLEFFIHRVGRTGRNGLSGTAITLYGPDEED
KVEQLEQLGIKFQPKQLKDHQLIDVKDRNQRSHRHASQKQLDPELIGLVKKKKAHVKPGY
RRQIQGAIRFKQIKDKKVSQRTASRARRKAKSDK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccaatttggacaatttaatttaaaagcaaatattataaaagcgatagatggc
attggctttgttaagccgaccaaaattcagcagcgtttgattccggcagtgatcgctggt
cgagatgtcgttggtcaatcacagacgggatctggtaaaacacatgtttttttgttagcc
attttcaatgctttggatccttcggtcaatgaggtccaagccgttattacatcgccatct
agagaattagctgaacaactttacgaggcttttcgtgattttcaaaaaagcctttcagaa
attgataaaaactttagtaatttaagaattgcaaattacgttggcggcactgatcgtcat
aaacaaacgaagcagcttgaaaagaatcaaccgcaagtggttattggtactccaggccgg
ttgaaagactttttgggtcagaatttgttactggtcaatcacaataagtttttcgtggtt
gacgaagctgatatggctttggatatgggctttttgactgatgttaatataattgcaagc
gctatgccatcggatttgcaaatgctggttttttcggcgacgattccagataaattaaca
ccttttttgaagaagtacatgaaagaaccactgatcgaagaaattccagtttcaacagtt
gttgctgatacgattgacaattacttgttagcaactaagtccaaaaacaaaaatgaagtt
atttatgatctattgacgcgtggcgagacttacttaagtttggtctttgccaacacgaaa
gaacgtgtacatgaaattgctaagtttttgactgctcaaggtttgaaggttgctgaggtt
catggtggtatcgagccaagagaacgtcgtcgtacgatgagacgtattaaaaatcaagag
tttcagtatgttgttgctagtgatctggcttctcgtggcttagatattgaaggcgtttcc
gaagttattaatgatgatatcccggttgatttagagttttttatccatcgagttggccgg
accggaagaaatggtttgtctgggactgctattacactttatggccccgatgaagaggat
aaagttgagcaattggaacagctgggtattaagtttcagccaaaacaattaaaggaccac
caattaattgatgttaaggatcgcaatcagcgcagccatcgacatgcttctcaaaaacag
cttgatccagaactaattggtcttgttaagaagaaaaaagctcatgtgaaaccgggttat
cggcgacaaatccaaggtgcgatcagatttaaacaaatcaaggacaaaaaggtaagccaa
agaacagcttctcgagccagaagaaaagcaaaatcagataaatga
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