Oenococcus sicerae: DLJ48_01050
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Entry
DLJ48_01050 CDS
T05833
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
osi
Oenococcus sicerae
Pathway
osi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DLJ48_01050 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osi03021
]
DLJ48_01050 (rpoC)
03400 DNA repair and recombination proteins [BR:
osi03400
]
DLJ48_01050 (rpoC)
Enzymes [BR:
osi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DLJ48_01050 (rpoC)
Transcription machinery [BR:
osi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DLJ48_01050 (rpoC)
DNA repair and recombination proteins [BR:
osi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DLJ48_01050 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QAS69207
UniProt:
A0AAJ1R9R4
LinkDB
All DBs
Position
complement(190670..194365)
Genome browser
AA seq
1231 aa
AA seq
DB search
MAIDVNKFESMQIGLASPAKIREWSYGEVKKPETINYRTLKAERDGLFDERIFGPIKDYE
CACGKYKRIRYKGIVCDRCGVEVTSSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLILD
MSPRSLEEIIYFASYVVIDAGNTSLEKKQLITEAEYRQYQDQYGADAFDAKMGAEAIKEL
LAEVDLEKQAKELKNDLKDATGQKRTRAVRRLDIVEAFLQSGNKPEWMVMDVVPVIPPDL
RPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPSIIVQNEKRMLQEAVDALIDN
GRRGRPVSGPGNRPLKSLSHLLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLP
RQMAVELFKPFIYNRLIELGTENGGANNLRSARRLVERHEDVVQDVLEEVVKEHPVLLNR
APTLHRLGIQAFEPVLVSGKAMRLHPLVTTAYNADFDGDQMAIHVPLSDEAQAEARLLML
AASHILAPKDGKPIVAPSQDMTIGNYYLTTEEADIQGEGMVFSSADEVKMALQNHEVALH
TRIGIAASSFDQAKPFTDQQRSRILATTVGKIIFNEILPADFPYINEPKSENFDGIDAHF
FLEPGTDIHEWLKNEPLNGPFKSGFLSDIIAQIYARYQVTRTSVLLDDMKDLGYDISTRS
GLTVAMSDVTELPQKGEVLKAAHERVAAITKQFRRGLLTDDERYTQVTQTWSDAQDKIKE
MLIASFDSKNPIFMMSDSGARGNISNFVQLAGMRGLMAAPNGKVIELPVTANFREGLSVL
EMFISTHGARKGMTDTALKTANSGYLTRRLVDVAQEVIVREDDCGTDRGLDVSAIMDGNE
VIEPLYDRILGRYAMKPVADPETGEVIVQKNEMIDESIANQIIDAGVLTVTIRSIFTCRT
EHGVCVKCYGRNMATGDIVEVGEAVGTVAAQSIGEPGTQLTMRTFHTGGVALSEDITQGL
PRVQEIFEARNPKGRAEISEVTGKVTSVEENPADRTKTVTIEGETDTREYILPISARLRV
AEGDEIHRSEAINEGPLDPKELIKVSSALKTENYMLAEVQKVYRMQGVGIADKHVEVMVR
QMLRKVRVMDPGQTDLLPGELLDIADFRRANTQAILSGNTAATSRPVLLGITKASLETNS
FLSAASFQETTRVLTDAAIRGKNDPLVGLKENVIIGKVIPAGTGVAAYRHIKDEVVAAPI
EPLEKIPTLDELQKSFDQTPANASSKSTAKK
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
ttggcaatagacgttaacaaatttgaatctatgcaaattggtctagcatcgccagctaag
atccgtgaatggtcttatggcgaagttaaaaagccagaaacgatcaactatcgtactttg
aaagctgaacgtgatggtctttttgacgaaagaattttcggaccaattaaagattatgaa
tgtgcttgtggcaaatacaagcgaatccgttataagggaattgtttgtgatcgttgtggt
gttgaagttacttcttcaaaagttcgccgcgaacggatgggccatatcgaacttgcagct
ccagtaacacacatttggtacttcaaaggaattccaagccgaatgggcttgattcttgac
atgagcccgcgctctcttgaagaaattatttattttgcaagctatgtggttattgatgct
ggtaatacatcgctcgaaaagaaacaactgattaccgaagctgaatatcgtcaatatcaa
gaccagtacggtgctgatgctttcgatgccaagatgggcgctgaagctatcaaggaatta
ttagctgaagttgatcttgaaaagcaagctaaagaattaaaaaatgatttgaaggatgca
actggacaaaagcgtacacgtgcggttcgccgtttggatatcgttgaagccttcttacaa
tctggcaacaaaccagaatggatggttatggacgttgtgcctgttattccacctgatcta
cgtccgatggttcagcttgaaggcggccgtttcgctacttctgatttgaatgatttatac
cgtcgtgttattaaccgcaataatcgtttgaagcgcttattggatttgaacgcaccaagc
attattgtccaaaacgaaaaacgtatgctgcaagaagctgttgatgccttgattgataat
ggccgtcgtggacgtcctgtttctggtcctggtaatcggccgttaaaatctttgtctcac
ctactaaaaggtaagcaaggtcgtttccgccagaacctgttaggaaaacgtgttgactat
tcaggccgttctgttattgatgttggtcctttcttaaagatgaaccaaatgggtctgcct
cgtcaaatggctgttgaattgttcaaacctttcatatacaaccgtttgatcgaattaggc
acagaaaatggcggcgctaataacctgcgttcggcacgccgtctagttgagcgccatgaa
gatgttgttcaagatgttctagaagaagttgttaaagagcatccagttctgcttaaccgc
gcgccaactttgcaccgtttaggcatccaagcttttgaacctgtacttgtttctggtaaa
gcaatgcgtttgcacccattagttacgactgcttataacgccgatttcgatggtgaccaa
atggctattcatgtgcctttgtcagatgaagcacaagctgaagcacgcttgcttatgctg
gctgcttcgcatattttggcacccaaagatgggaaaccgattgttgcgccttcacaagat
atgacgatcggtaactactatctaacgactgaagaagccgatattcaaggcgagggaatg
gtcttttcttccgctgatgaagttaaaatggctttgcaaaatcatgaagttgcattgcat
acgcgaattggtattgctgcttctagttttgatcaggcaaaaccattcacggatcaacaa
cgttcgaggattttggcaacaacggttggaaaaattatctttaacgaaattttaccggct
gattttccatatattaacgaaccgaaatcagagaattttgatggtattgatgcccatttc
ttccttgaacctggaacagatattcatgaatggcttaaaaacgaacccttgaatggtcca
ttcaagtctggttttctgtccgacatcattgctcaaatttacgcgcgttatcaagtaact
cgaacttctgttttgttggatgatatgaaggatcttggatatgatatctcgactcgttca
ggattgaccgttgccatgtctgatgtgaccgagttgcctcagaaaggtgaggtgcttaaa
gctgctcacgaaagagtcgcagccattacaaaacagttccgtcgcggtctattgactgac
gatgagcgttacacacaagtaacacagacttggtcggacgctcaagataagatcaaggag
atgctgattgcttcctttgactccaagaacccgatctttatgatgagtgattctggtgct
cgtggaaacatctcaaacttcgtccagcttgctggtatgcgtggtttgatggccgctcct
aacggaaaagttatcgagcttcctgttacggctaacttccgtgaaggcctttctgttttg
gaaatgttcatttcgactcatggtgctcgtaaaggtatgactgatacagctttgaagact
gctaactctggatacttgactcgtcgtctagtggatgttgctcaagaagtcattgtgcgt
gaagatgattgtggtactgatcgtggacttgatgtttctgcaatcatggacggcaatgaa
gtcattgaacctttatatgaccgtatcttaggtcgttatgctatgaaaccagttgctgat
ccagagactggcgaggtcattgttcaaaaaaatgaaatgattgacgaaagcattgctaat
caaatcattgatgctggtgtcttaactgttacgatccgttcgatttttacttgccgtact
gaacatggtgtctgtgttaaatgttatggtcgcaacatggcgactggtgacatcgttgaa
gttggtgaagccgttggaaccgttgcagctcagtctattggtgaacccggtactcaattg
actatgcgtactttccatactggcggcgttgcgttgtcagaagatatcacacaaggtttg
ccgcgtgtgcaggaaatttttgaagctcgtaatcctaagggccgtgccgaaatttctgaa
gtgacaggtaaagtgactagtgttgaagaaaatccagctgaccgcactaaaactgtcacg
attgaaggcgagactgatactcgtgagtatatcctgccgatctcagctcgtttgcgtgtt
gcggagggcgatgaaatccatcgttctgaggctattaatgaggggcctttggatcctaag
gaactgatcaaggtttctagcgctttgaagaccgaaaactatatgttagctgaagttcaa
aaagtttatcgtatgcaaggtgttggcattgctgataaacatgtcgaagttatggttcgc
cagatgttgcgtaaagttcgtgtcatggatcctggacaaacggatctgctacccggtgag
ctacttgacattgctgacttccgtcgtgctaatacacaagccattctctctggcaatacc
gctgcgacatctcgtccggttttgcttggtattacgaaagcttctttggaaacaaattca
ttcttatcagctgcatcattccaagagacgacacgtgtcttgacggatgctgctattcgc
ggtaaaaacgatccactagttggtttaaaggaaaatgtgattatcggtaaggttattcct
gccggaaccggtgtcgcggcatatcgccatattaaagacgaggttgttgctgcacctatt
gaacctttggaaaaaattcctactttggatgaattgcaaaagtcttttgatcaaacaccg
gctaatgccagttctaaatcaactgctaaaaagtag
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