Oenococcus sicerae: DLJ48_03450
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Entry
DLJ48_03450 CDS
T05833
Name
(GenBank) hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
osi
Oenococcus sicerae
Pathway
osi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DLJ48_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osi03019
]
DLJ48_03450
Messenger RNA biogenesis [BR:
osi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DLJ48_03450
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
RMMBL
Motif
Other DBs
NCBI-ProteinID:
QAS69640
UniProt:
A0AAJ1RBV0
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Position
complement(682971..684191)
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AA seq
406 aa
AA seq
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MTTKAKFLNGLNTIGGNIVSFANNKTRIFMDFGVPEDSKAGDSITSLIEKGILPDTPELF
TENARQTYDQQAIFISHLHIDHIGALKFLKPQLPIYMSAQSKKLYDDLIQAGDELPIADL
QAVDYGQMVKIGPFTVTFFQSDHDVIGASAIEVVDDQGHHFVHSGDLRYNGPYPQRLDHW
TQAVAQTQPDLFLIEGTSFSFDDDKGDHAQAASTNVEADLLQHFIDKLPSNHLLAINPYP
RNVERLYALEMAANDFGRPIVWESFYAGLLKQFFPKTRPLVLGKDIDLSQIIAYPENYVL
QNSYDHLDYLKDFYKPIFLQMNGEPLGDYDPRYQLQQAKLTQFAAEFIYAGASGHATQAD
LLKAAKRVHAKLTIPWHSFKPEIEAAALRGEGLTAKIASKNEVISF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaagcaaaatttttgaatggtttgaatacgatcggtggtaacattgtgagt
tttgcaaataataaaacaagaatcttcatggattttggtgtgcctgaagattctaaggct
ggtgattcgatcacgagtttgattgaaaagggtattttgccggatacacctgaattgttt
actgagaatgctaggcagacttatgaccagcaagcaatttttatttcacatctgcatatt
gatcatattggtgctttaaaatttttgaagccccagctgccgatctatatgtctgcacaa
tctaaaaaattgtatgatgatttgattcaagccggcgatgagctgcctattgccgatctg
caagcggttgactatgggcaaatggtcaaaatcggtccctttactgttactttctttcag
tctgaccatgatgttattggtgctagtgctattgaagtagttgatgatcaaggacaccat
tttgttcattctggtgacttgcgttataacggtccctatccccaaagacttgaccattgg
acacaagctgtggcgcaaacacagccggatttatttttaattgagggaaccagtttttct
ttcgatgatgataaaggcgatcatgcgcaagcggcatctacaaatgttgaagcagatctg
cttcaacattttattgataaactaccatcgaatcatctgttagctatcaatccttatcca
agaaacgttgaacgtctatatgcactggaaatggctgctaacgactttggtcgaccaatt
gtttgggaatctttttatgccggattactaaaacaatttttcccaaagacccgaccgctg
gtacttggcaaagatattgatctatcgcaaataatcgcttacccggaaaattatgttttg
caaaacagctacgatcacttggattatttaaaagatttttataaaccgattttcttacag
atgaatggtgagcctttaggtgattatgatcccagatatcagcttcagcaagctaaatta
acacaatttgcggctgaatttatttacgcaggcgcttcgggtcacgcgacgcaagcagat
ctattaaaagctgccaaacgggtgcacgccaaattgacaattccttggcattcttttaag
ccggaaatagaagcggcagccttaagaggagaaggcttgacggctaaaatagcaagcaaa
aatgaagttattagtttttag
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