Oenococcus sicerae: DLJ48_04870
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Entry
DLJ48_04870 CDS
T05833
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
osi
Oenococcus sicerae
Pathway
osi03420
Nucleotide excision repair
osi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DLJ48_04870 (pcrA)
03430 Mismatch repair
DLJ48_04870 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osi03400
]
DLJ48_04870 (pcrA)
Enzymes [BR:
osi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DLJ48_04870 (pcrA)
DNA repair and recombination proteins [BR:
osi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DLJ48_04870 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DLJ48_04870 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Rac1
AAA_22
ResIII
Anticodon_2
Motif
Other DBs
NCBI-ProteinID:
QAS69901
LinkDB
All DBs
Position
959559..961808
Genome browser
AA seq
749 aa
AA seq
DB search
MKDLLAGLNDKQKEAVLTTEGPLLIMAGAGSGKTRVLTHRVAYLVQQKHIDPWSILAITF
TNKAAREMKERIARLVDQEDARAIWVSTFHALSARVLRRDVDKIGFTTSFSILDGSGQKT
LMKHVLNDLNYDSNQYDPKSILAAVSNFKNALQTPHDARDAAKTTFDEAVAESYDLYQRR
LEQSQSMDFDDLIMRTIQLFKQAPDVLHYYQRKFKYIHVDEYQDTNAAQYKLVAMLAAGD
FGSQNLAVVGDSDQSIYGWRGADMNNILNFEKDFPGAKTVVLEQNYRSTKNILTAANQVI
QNNIERKPKNLWTENQAGNLIHYYRAQSESDEAHYVLTKIQDGVKAGRSLNDFAILFRTN
AQSRVFEQIFSANRIQYTIVGGTRFFERKEIQDIVAYLQLAANLDNDTAFERIVNEPKRA
IGNSSLEKLRAFAVKNNLSLMQAIAVLDDESQLSSKAQKNFRQFAQMVHDFKDQSHFLPV
TELTNEIFTKTGIREQYVKKSDLESQARVENLDEFLSQTHQFDEDYDEEASETKNALVDF
LGQTALVSDLDSYDEAAGQVTLMTVHAAKGLEFPVVFIVGLEEGIFPSARAMMERDGLEE
ERRLAYVAITRAQQELYLTNAYGRLLYGRAQSNEPSMFIDEINDALLDKENAAAAGVRNV
SGDYDRPMPFDRQSASASRKHEAAFAPTYQGTGAEKTDWQLGDRVKHKIFGTGRIVAINN
DGEDKLLKIAFASRGIKQLMASFAPIEKI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggatttattagcaggtttaaatgataaacaaaaagaagcggttctgaccactgaa
ggaccgcttttgattatggccggagcgggttctggcaaaacgcgagttttgacacatcgt
gtcgcatatttggttcagcagaagcatattgatccatggtcgattttggcgattactttt
acgaacaaagctgcccgtgaaatgaaagaacgaattgcacgtcttgtcgatcaagaagat
gcacgcgcgatttgggtatcgacttttcatgcgctttcggctcgagttctgcgccgcgat
gttgataagatcggttttacgactagcttttcaattttggatggcagcgggcaaaagacc
ctgatgaaacatgttttaaatgatttaaattacgatagcaaccaatacgatccaaaatca
attttggccgctgtttctaactttaagaacgcactgcaaacacctcacgatgctagagac
gctgctaaaacaacttttgacgaagctgttgccgaatcttatgatttataccagcgccgt
ctagaacagtctcaatcaatggattttgatgatttaatcatgcgtacgattcagttattt
aagcaagcaccggatgtattgcactattatcagcgcaaatttaaatacattcatgttgat
gaatatcaagatacgaacgctgctcagtataagttggtcgcgatgctggcggccggtgat
tttggttcacaaaatttggcagtcgttggtgactctgaccagagtatttatggctggcgc
ggtgctgatatgaacaatatcttgaacttcgaaaaagattttcctggtgctaaaacagtt
gtcttggaacaaaattaccggtcaacgaaaaatatcctcacagcagctaaccaagtcatt
caaaacaacatcgaacgcaagccgaagaatctttggacagaaaatcaagcgggcaatttg
atccattattatcgtgcgcagtccgagtcggacgaagcacattatgtgttgacgaaaatt
caggacggcgtcaaggctggccgcagtttgaatgattttgcgatcctctttcgtacgaat
gctcaatcacgtgtttttgaacagatttttagtgcgaatcggattcaatacacaatcgtt
ggcggtacacgtttcttcgaacgaaaagagatacaagatattgtggcttatttacaattg
gctgcaaatctggacaacgacacagcttttgaaagaatcgtgaatgaacccaagcgggca
attggcaacagttcactggaaaaattacgtgcttttgctgtaaaaaataatctttcattg
atgcaagcgattgctgttttggacgatgagagccagctatccagcaaagcgcaaaagaac
tttcgccaatttgcacaaatggttcatgattttaaggatcaatcgcattttttgcctgtc
acggaattaacgaatgagatttttactaagacaggcatccgtgaacaatatgtcaaaaaa
agtgatttggaatcacaagcacgagttgaaaatttagatgaatttttgtcgcaaacgcat
cagtttgatgaagattatgatgaggaagcttccgaaacaaaaaatgccttagttgatttt
cttgggcagacagctctcgtgagtgatcttgactcttacgatgaggccgctggtcaagtc
actttaatgaccgtacatgctgccaagggattggaatttcctgtagtctttatcgttggc
ttagaggagggtatttttccatcagctcgtgcaatgatggaacgggacggtcttgaagag
gaaagacggttggcttatgtggccatcacaagggctcaacaagaactctatttgacgaat
gcttacggacgtttgctgtatggccgtgcacaatccaatgagccatccatgtttattgac
gaaatcaatgacgctttgttagataaagaaaatgccgctgcggctggcgttcgaaatgtt
tctggtgactatgatcgaccaatgccttttgatcgacagtcggcttctgctagtcgaaaa
catgaagcggcttttgcgccgacttatcaaggtactggagccgagaagacagattggcag
cttggtgatcgtgtcaagcacaaaatttttggaactggcagaattgtggcaattaataat
gatggtgaagataaattattaaaaatcgcattcgcttctcggggtatcaaacaattaatg
gcttcttttgcgccgatcgagaagatataa
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integrated database retrieval system
