Oenococcus sicerae: DLJ48_07200
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Entry
DLJ48_07200 CDS
T05833
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
osi
Oenococcus sicerae
Brite
KEGG Orthology (KO) [BR:
osi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osi03019
]
DLJ48_07200
Messenger RNA biogenesis [BR:
osi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DLJ48_07200
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
HDOD
Motif
Other DBs
NCBI-ProteinID:
QAS70323
UniProt:
A0AAJ1R8S8
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All DBs
Position
1387018..1387974
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AA seq
318 aa
AA seq
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MLSDHKKGETYSIYLLIKAAEKRTTSKGSPYIRLTLTDRSGEIQANLWDASDQDVEKYIA
GRVAYLTVLQDEYQSKAQLKIQEIRLANDSEPGDPSLYEISSPISKKDLQSQVSDLLFQI
TNPTWNRIVRNVLNKYADKYYDYPAAEKLHHAYRGGLAFHSLSIAKLAIKVAELYPQINL
SLLLSGALLHDIGKTVELSGPVGTEYTNEGQLLGHIVIGDEILVESAEELGFDLHSEDML
LLRHLIISHHNKLEFGSPIPPRELEAYVLSKLDDLDAHIQMITAALNKTERGHFSEKIFG
ADNQPYYRSNADLPQNHD
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcgatcataaaaaaggcgaaacatatagcatttatcttttaattaaagctgct
gaaaaaaggacaaccagcaagggttcgccttatattcgtttgaccctaactgatcgttcg
ggagaaatccaagctaatctttgggatgcaagtgatcaagatgtcgaaaagtatattgcc
ggcagagttgcttatttaaccgttctccaagatgagtatcagtcgaaggcgcaattgaag
attcaggaaatccgcttagctaatgacagtgaaccaggtgatccgtcactttatgagatt
agttctccgatttccaaaaaagacttgcaatcacaagtcagcgatcttttgtttcagatt
acaaaccctacttggaatcgaattgtccgcaatgttttaaataaatatgctgataaatat
tatgattatccagcggctgaaaaattgcatcatgcttatcgcggcggcttggcttttcat
tctctttctattgcgaaattagcgatcaaagtggcagagctgtaccctcagatcaatctt
tctctgctgttgtctggggctctgctgcacgatattggcaaaacagttgaattgtctgga
ccggttggcactgaatatacaaatgaaggacagctattaggccatattgtgatcggcgat
gagattcttgttgaatcagctgaagaattaggttttgatttgcattccgaagatatgctg
ctgctaaggcaccttatcattagccaccataataagcttgagtttggttcgccgatccct
cctcgagaacttgaggcgtatgtactgtccaaattggatgatctcgatgctcatattcag
atgatcacggctgctttaaataagactgagaggggccatttttctgaaaaaatctttggt
gcagataatcagccctactatcgttcgaacgctgatttaccgcaaaaccacgactaa
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