Oenococcus sicerae: DLJ48_07945
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Entry
DLJ48_07945 CDS
T05833
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
osi
Oenococcus sicerae
Brite
KEGG Orthology (KO) [BR:
osi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osi03032
]
DLJ48_07945 (topA)
03400 DNA repair and recombination proteins [BR:
osi03400
]
DLJ48_07945 (topA)
Enzymes [BR:
osi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DLJ48_07945 (topA)
DNA replication proteins [BR:
osi03032
]
Prokaryotic type
DNA Topoisomerases
DLJ48_07945 (topA)
DNA repair and recombination proteins [BR:
osi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DLJ48_07945 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DnaJ_CXXCXGXG
YoaP
Zn_ribbon_GRF
Motif
Other DBs
NCBI-ProteinID:
QAS70455
LinkDB
All DBs
Position
1540184..1542190
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AA seq
668 aa
AA seq
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MVTKKTKAKKLVIVESPAKARTIENYLGKDYQVLASMGHIRDLPKSQLGVDTEHNYEPKY
INIRGKAPLINSLKKAAKAASAVYVASDPDREGEAIAWHLEHILGLPENGKNRVTFNEIT
KPAVKEAFKHPRGIEQDLVDAQQARRVLDRLVGYSISPILWKKVKRGLSAGRVQSVALGL
ILDKEKEISAFIPQEYWRLDADFKAGKHEFSAEFYGTDGKKIKLENQKIVSAILKRINSD
EDFQITDLSTKESKRNAPNPFTTSTLQQTANSQLNYHARKTMQIAQGLYEGLSLPKVGHV
GLITYMRTDSTRLSETAQTMAKEFILKEYGEEYYHRHNVVKKSDTVQDAHEAVRPTDVKR
TPESLKTILTHDQYRLYNLIWSRFVASQMSEQKLENQALMIEQNKVTWRSTGIKVLFEGW
TKALKTSSTKNNILPALKIGDHVQMVNNFPEQHYTLPPARYTEASLIKALEEIGVGRPST
YAPTMDTLQRRGYIGFDQKKIVPTDLGDIVQDVVVKSFPEVTDKSFTSKIESELDKVEVG
DSKWQTVIDEFYKPFSQEVDAALENIEKVPIYDRIAPELCDTCGGLMVIRRSRRGEFYAC
SRFPDCHGTKSIVEQIGMKCPKCGIGEVVVKRTKRGRVFYGCSRYPDCDFASWTKPKKPE
VKETANAK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtggtaactaaaaagacaaaagcaaaaaaattagtcattgttgaaagtcccgctaaagca
cggacgatcgagaattatttagggaaagattatcaggtattagcatctatgggtcacatt
cgcgacctgcctaaatcgcagttaggtgtagacaccgagcataattatgaacccaagtat
attaatattcgtggtaaagcaccactgattaattcattaaaaaaagcagctaaagcagca
tctgctgtgtatgttgcgtcagatccggatcgtgaaggcgaagcgatcgcttggcatttg
gaacatattttaggtttacctgaaaatggtaaaaatcgggtcacttttaatgaaataacc
aaaccagctgtcaaagaagctttcaaacacccgcgtggcatcgaacaagatctcgttgat
gctcagcaggcaagaagagttttggaccgcctggttggatactcaattagtcccattctt
tggaaaaaagtaaaacggggtctttctgctggccgtgttcaatctgttgccttagggctg
atccttgacaaagaaaaagaaatttcagccttcattcctcaggagtattggcgtttagat
gctgattttaaagctggtaaacatgaattttccgccgaattttacggtactgatggtaaa
aaaatcaagttagaaaatcaaaaaatcgtttccgctattctaaaaagaatcaactctgac
gaagattttcaaattacagacttatcaactaaagagtctaaacgcaatgcaccaaatcct
tttacaacttcgactttacagcaaacagccaattcacagttgaattatcatgcccgtaaa
accatgcagatcgcgcaagggctttacgaaggacttagcttgccaaaagttggccatgtg
ggcttaattacttatatgcgtaccgattcgactcgtttatcagaaacggctcaaacgatg
gccaaagaattcattttaaaggaatacggcgaggagtattatcaccgtcataatgttgtt
aaaaaatcggatacggtccaagacgcccatgaagcggtccgcccaaccgatgtcaagcgc
acgccagaatctttgaaaacaattttaactcatgatcaataccgtctttataacttgatt
tggtctcgtttcgttgccagccaaatgagtgagcagaagttagagaaccaggcactgatg
atcgaacaaaataaagtcacttggcgttcaactggtatcaaagttctttttgaaggttgg
actaaagcactcaaaacatcttcaacgaagaataatattttaccagcattaaaaattggt
gatcatgttcaaatggttaataattttccagaacagcattatacattgccgcctgcccga
tataccgaagccagcctgatcaaagcgttggaagaaataggtgtaggacgtccatcaacc
tatgcgccaaccatggataccttgcaacggcgcggttatatcggatttgatcagaaaaaa
atcgtgccgacagaccttggcgacattgtacaagatgtcgttgtgaaatcttttcctgaa
gtaacagataaaagtttcacttcaaaaatcgaaagcgaattggacaaagtcgaggtcgga
gattctaaatggcaaacagttattgatgaattctataagcctttcagtcaagaggtcgat
gctgctctagaaaacattgaaaaggtcccaatttatgatcgaattgcacctgaattatgt
gatacttgtggcggtctgatggtcattcgtcgatcgagaaggggtgaattttatgcttgt
tcccgttttccagactgtcatgggacaaaatcaattgttgaacaaattggtatgaaatgt
ccaaaatgcggtattggtgaggttgttgttaaacgaacaaagcgcggccgcgtcttttac
ggctgttctcgctatcccgactgtgattttgctagttggacaaaaccaaaaaagcccgag
gttaaagaaacagctaatgcaaaataa
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