Octopus sinensis (East Asian common octopus): 115209644
Help
Entry
115209644 CDS
T07665
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115209644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115209644
03009 Ribosome biogenesis [BR:
osn03009
]
115209644
03036 Chromosome and associated proteins [BR:
osn03036
]
115209644
Enzymes [BR:
osn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
115209644
Messenger RNA biogenesis [BR:
osn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
115209644
Ribosome biogenesis [BR:
osn03009
]
Eukaryotic type
90S particles
RNase
115209644
Prokaryotic type
rRNA processing factors
115209644
Chromosome and associated proteins [BR:
osn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
115209644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-GeneID:
115209644
NCBI-ProteinID:
XP_029633961
UniProt:
A0A6P7S793
LinkDB
All DBs
Position
LG3:complement(97188337..97237406)
Genome browser
AA seq
1503 aa
AA seq
DB search
MSYRGRPVVSRGSNYVPQPRLAVHPVNYLSSPPPQLINAPNRQAAPVVPPQHPLSLPPQG
SGVSVPPPPPPPVGPPPPVPLPSQSIGSGVGGYVPSGGPPPPPPPLPGSLGMPPFPPNNP
SGCVTVGVSVPPPPLPPLPPPTSLIGPVAAAAAAAAAAAATAPLCQPYPNVWSGSYPTTY
PVHSSMASRPNHFPQWKSPGSVPSTGQKQQPPPPLPPLGRACIGPGSGSGTNNNINNNNI
HNNGSSMYHGPPLGHPKSNPPLLTDGGECSGSGVGEAIPVISLKGCESHQHGMHNSMCSS
YISGCGVSRDRDRDRGDRERDLNRDRDRDRDRDRDRDRDRDRDRDRDRERDSSHFSSNSS
SSLSSLHCKNGSSLLCPVRCDREKISSGSTLSSYSSSGTSKGMYGTSLNSSNSISSHHSK
SKERKRLYEPRSESPHYSRRKDNEKHSSSWSRPSRHRSRSPSPRKSEKTSERRDHRRSPA
LGSSSVSSSSSKKRSWSKESDSRESRETKKPRRPEKPESPEPLRKEYKKEKTEKSDTPAW
IRCSPADLYFYRDKQTNCLMATQKMIDLQHRFQTELCDRAKTIIETRPKYEEPKRPIITH
IHDSPTSEVTTWTFHTNRHCSVDDSTDDSDDTDDSGSEETTNEWLEELNRKKRHPYRLHE
ELWYNDPGEMNDGPLCRCSLKARKTGIRHNIFPGEEEIIPCVSESNNANRLYHYHITMSP
STNFLSKNPTIIEHDNHEYIFEGFSLLSHYQLENVPVCKVIRFNIEYTIHFFEEKMPENF
TVRSLDQVCHFLFNEILELVDLDWKGPGNEISCSRFHLMPRFARELPDNGKEILSMNEVL
LYLLGSSKPLLEETELAQLLKYDNNEWQNLVDEVRGMIVSKPGMKPSSIRVDQLDRQQLK
PDVITYPLIIHFGIRPAQLSYAGDPNYQKAWKQYVKYKHLLTSKPKVTYADKNKLQMKEE
FLQQLRLKSTMKREVTVEISSEGFIRTGIKSDVCQHVMLLPVLLCHLRFHKSLAILEGYL
GYKFSDRSLLQLALTHTSYRVNYGTNPDHARNSLTNCGSRQVEYGDRKIHYVHTRKRGIN
ILIDIMSRMGHKEETSSEIPHNERMEFLGDAVVEFLSSVHLFFMFPGLEEGGLTTYRAAI
VQNQHLAVLAKKLHLQDFMLYAHGPDLCYESDLKHAMANCFEALMGALFLDGGVDLVDKI
FAKTLFDDTDLVRTWKQLPLHPLQEDEPEGDRHWVESSPALQKLVRFEDDTGITFCHIRL
LARAFTLRNVGYNNLTLGHNQRLEFLGDTVLQLVASEYLFRHFPDHHEGHLSLLRSSLVN
NRTQAIVCDDLGMSNYVIYADTRGDHLEMKPKEKADLLEAFIGALYVDKALDYCRVFCNV
CFFPRLRDFILNQDWNDPKSQLQQCCLTLRELDGGEPDIPIYKVIESSGPTNTRKYTVAV
YFRGERLATGIGHSIQQAEMAAATNALNQRSELFPILAHQKRFLERRHPKKKRRSSRRQD
EHH
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatagagggagacccgttgtatctcgtggatcaaattatgtaccacagcctcga
cttgctgtacatcctgtcaactacctcagctctccaccacctcagctcattaatgctccc
aaccgacaagctgctccagttgttccacctcaacacccactgtctctcccacctcagggt
agtggcgtttctgttcctcctccacctccaccaccagtcggtccaccacctccggtacca
cttccatcacagagcattggcagtggggtaggtggatatgtaccctctgggggtcccccg
cctcctccaccaccattacctggctccttagggatgcccccgtttccaccaaacaatcct
agtgggtgtgtgacggtgggtgtgtctgtgccaccacctcccctaccaccccttccacca
cctacatctctgattggccctgtagcagcagcggcagcagcagcagctgctgcagcggca
acagccccactgtgccaaccatatcctaatgtctggagtgggtcataccccaccacatat
cctgtccacagcagtatggcttccagacccaaccacttcccacagtggaagtctccaggg
agtgttccatctacaggccagaagcagcagccccctccaccccttcctcccctaggtagg
gcctgcataggaccagggagtggttcagggacgaataacaacattaacaataacaacatt
cacaataatggtagcagcatgtaccatggcccacccttgggacaccccaaatcaaacccg
ccattgttgacagatggtggggaatgcagtggcagtggtgttggtgaagcaatccctgtg
atctcattgaaaggctgtgagagccatcagcatgggatgcacaatagcatgtgcagttcg
tacataagcggttgtggtgtcagtcgagaccgtgacagggaccgtggtgaccgagaaagg
gacttgaatcgagacagagacagagacagggaccgagatcgagaccgcgaccgtgacaga
gaccgtgaccgtgatagggatcgagaaagagacagctcccacttctcttcaaattcttct
tcctcattgtcatcactgcattgcaagaatggcagcagtctcctgtgtccagtgcgttgt
gatcgagaaaagatatccagtggctcgactctgtcatcctatagttctagtggaacaagt
aaaggcatgtatggcacttcactgaactccagtaatagtattagtagtcaccactcgaag
agcaaagagagaaagcgactgtatgaaccacggtcagaatcgccacattattcaagaaga
aaagacaatgaaaaacacagtagttcttggagcagaccaagtagacacagatcaaggtca
ccatcaccgagaaaaagtgaaaaaactagtgagagaagagatcatcgtcgaagtccagct
cttgggtccagctcagtgtctagttctagtagtaagaaaagatcttggagtaaagagagt
gattcacgagagagcagagaaacgaagaagccaagacggcctgagaaaccagaatctcct
gaacctctgcggaaggagtacaaaaaagaaaaaactgaaaaaagtgatactccagcttgg
ataaggtgttctccagctgatttgtacttttaccgtgataagcaaactaactgtttgatg
gctacacaaaagatgatagatctacaacaccgtttccaaacagaattgtgtgaccgggca
aaaacgatcatagaaaccagaccaaagtatgaagaacctaaaagaccaataataacacac
atccatgacagtccaaccagtgaggtgacgacttggacttttcatacaaacagacattgt
tcagtcgacgattctaccgatgattctgatgatactgatgacagtggttctgaagagacg
accaatgagtggctagaggaattgaaccgtaaaaagcgtcatccatatcgattacatgaa
gaattatggtacaatgatccaggagaaatgaatgatggaccactctgtcgttgcagtcta
aaagcacgaaagactggaattcgacacaatatattccctggagaagaggaaatcattcca
tgtgtttcagagagtaataatgccaacaggttataccattatcacatcaccatgtcacca
tccacaaattttttgagtaaaaaccccaccatcattgagcatgataatcatgaatatatc
tttgaaggattttctcttctttctcattaccagttagagaacgttcctgtttgtaaagtg
atccgattcaatattgaatacacaatccatttttttgaggagaaaatgccagagaatttc
actgttcggtccctggatcaagtgtgtcatttcctctttaatgagatcctagaacttgta
gatttggactggaaaggccccggaaatgaaatcagttgtagtaggtttcatcttatgcct
cggtttgcacgcgaattgccagacaatggtaaagaaattttgtcaatgaatgaagtactg
ctatatttgttgggcagttccaagcctcttctggaagagacggaactggctcagcttctt
aaatatgacaacaatgagtggcagaacttggtagatgaagttcgaggtatgattgtcagt
aaacctggaatgaaaccaagttctatccgtgttgaccaacttgatcggcagcagttaaaa
ccagatgtgatcacatatcctctcatcattcattttggtatacgtccagcacagctcagt
tatgccggtgaccctaattatcagaaagcctggaaacaatatgtgaagtataaacacctg
ctaacgagcaaaccaaaagtaacatatgcagataaaaacaaattacagatgaaggaagaa
tttctacagcaattgcgactcaaaagtacaatgaaaagagaagtgactgtggaaatcagc
agtgaaggttttatccgaactggtatcaagtctgatgtgtgtcagcatgtcatgttatta
cctgttttgttatgtcatctacgattccataagtctttggccattcttgaaggctattta
ggctataaattcagtgaccgcagtctgctacagttggcactcacgcacacctcttatcga
gtgaactatggcaccaaccctgaccacgctcgtaactcattgaccaactgtggctcacgt
caagtggaatacggagaccgtaaaatacattacgttcatacaagaaaaagaggcatcaat
attctcattgatatcatgtcccggatgggacataaagaagaaacatcttctgaaatacct
cataatgaaaggatggagttcctgggtgatgctgttgttgaattcctatcaagcgtccac
ttattcttcatgtttccaggcttagaagaaggtggtctcacaacatatcgggcagctata
gttcaaaaccaacatttagctgttcttgcaaaaaaacttcacctgcaggatttcatgctc
tatgctcatggccctgatttatgttatgaatcagaccttaaacatgccatggccaactgt
tttgaagctttgatgggtgctttgtttcttgatggaggtgttgatttggtagacaagatc
tttgccaagacgttatttgatgatacagacctggtacgtacttggaaacaacttcctctc
cacccattacaggaggatgaaccagaaggagaccgtcactgggtagaatcatcaccagca
cttcagaaattggtgagatttgaagatgacacaggtatcaccttctgccatatcagactc
ctggctagagctttcactctccgcaatgtgggatacaacaacttgactctaggtcacaat
caacgacttgagtttcttggtgacactgtcctacaactggttgcctctgaatatctattc
cgtcattttccagaccatcatgaaggtcacttgtctttattacgaagttctctggtaaac
aacagaacccaggccattgtgtgtgatgacctgggtatgtctaactatgttatttatgct
gacacccgaggtgaccatctggaaatgaaaccaaaggagaaagctgatttactagaagca
ttcattggggctctctacgtggacaaagctcttgattattgccgtgtcttctgcaatgtc
tgttttttcccaagactcagagacttcatcttgaatcaggattggaatgatccgaaatca
cagcttcagcaatgttgtttgacattacgagaactagatggtggtgaaccagatatacca
atatacaaggttatagagtcatctggtccaacaaacacaagaaaatatactgtagctgtg
tatttccgtggagaacgtctggctacaggaattggtcacagtatccaacaagctgaaatg
gctgctgctacaaatgcactcaaccagagatcagaactgttcccaattttggctcaccaa
aagagattcctagaacgacggcaccctaaaaagaaaaggcgaagttctcgtcgccaagat
gaacaccactga
DBGET
integrated database retrieval system
