Octopus sinensis (East Asian common octopus): 115209697
Help
Entry
115209697 CDS
T07665
Name
(RefSeq) replication factor C subunit 1 isoform X3
KO
K10754
replication factor C subunit 1
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03030
DNA replication
osn03410
Base excision repair
osn03420
Nucleotide excision repair
osn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115209697
03410 Base excision repair
115209697
03420 Nucleotide excision repair
115209697
03430 Mismatch repair
115209697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osn03032
]
115209697
03400 DNA repair and recombination proteins [BR:
osn03400
]
115209697
DNA replication proteins [BR:
osn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115209697
DNA repair and recombination proteins [BR:
osn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115209697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_30
AAA_22
PTCB-BRCT
RuvB_N
BRCT_2
AAA_16
RNA_helicase
AAA_33
AAA_14
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
115209697
NCBI-ProteinID:
XP_029634045
UniProt:
A0A6P7S774
LinkDB
All DBs
Position
LG3:complement(70672345..70725761)
Genome browser
AA seq
1294 aa
AA seq
DB search
MDIRNYFGSIGSSAKKVTSTPNKPKELIPTKSDGLKSNKSPKDLIILEENNNIDKREKPG
KKLNASNHSVEKRVNENVLGGKKLAATTPEQVKKKEKYNGKGSRADENSTNKSSHQEKNV
DNKKETSKKKTEKKQSEDIGKVSGKKRRYFSDSDDDFDVKKMKTSPKQMDNSREHDKKSI
SKKDKDKKSVSKNDKEKTMEKKKEKLNKSQEEAGKEKSRVASKEKSARIGKEEMVMYVDS
DVDSDSSPLKKTSKKKDKKKNIKISSEEEKEESDDDVSRRIIKKGKKKKKKHSYRISDSD
SEEEVKVKKPREKKPKKRQPMFCESDEDDGMKSSIKTFFKPQSQNEKPTSSKNAKSPAKR
EAVSSADFFGSSVVERTERKVTIKEKNEVDESFEDEFHDDDDFLATLAQLDEEIPVNKKA
KGKTPEKKAVTPQKHTPSKITSSCSVTPKKSVTLSKVTPEKRLTPRRGTPEMTVTYCKDT
PERTSKQLTPSKSATSSSSPGNSLTSKLAAKMKEKKEEPVRASPKTPTKTPSQKPKVNIP
ETPTPNPADRKTSYLSYLNREGPQHLGSKEIPTGAENCLEGLTFVITGVLDSIERDEAKS
LIERYGGRVTLSLSRKTNYLIVGREPGQTKIQKASSLKTPQIDEDGLLDLIRSKPGKKSK
FLIDAEKTVKKENLEAKKNEKESNVSGVKRNVKSPLKASCVPSTSDSAKETKPDTTNIPK
TPSDTSLLWVDKYKPSTLKQIIGQNGDKSNAKKLFNWISNWHANRAAGIKPQPNRFYRGN
DNGAGSKAALLSGPPGIGKTTTAHVVCKEAGFSLVEMNASDTRNKSSLSEELATLLKNTS
LVDYCGTERSSSNGFKHCVIMDEVDGMAGNEDRGGVAELIQLVKTTKIPIICICNDRQHQ
KIRSLANHCFDLRFQRPHMAQIKAAMMTIAYKEGLQINPGALNEIISASNHDIRQVIHNL
FMWSSSNKNISYEDAKSNAEMAKKDIKLNPFDVCRQVFAGGEKKMSFIDKSDLFFHNYQL
APLFVQENYASVEPFAGRGNTAKHLSLLAHAANSICDGDIVEKLIRQRQNWSLLPVEAVY
ASVLPGEYMRGSVNYMVSFPSWLGKYSSQNKNQRILQELGGHMKLNISADLRGLNLDYLP
CLQQHLVKPLQEQQKEGVPEVIALMDKYDLLKEDYDNIMDITKWPNSKDYTKSLTTATKA
AFTRSYNKESHLTPYATGTVSKKRAKAESAGDDVFGDGSTIDQTSDREDADSDGDVTKDT
MIKKSANKSSEKTDVSKGKGKGKGKGKGQSKSSL
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagaaattattttggatctattggaagttcagctaaaaaggtaacttctaca
ccaaataaacccaaagagttaattcctactaaatcagatggtttgaaaagtaataaatct
ccaaaggatcttattatcttagaggagaacaacaacattgataagcgagagaaacctgga
aagaagctaaatgccagcaatcactcagttgaaaaacgtgttaatgaaaatgtattggga
ggaaagaaacttgctgcaactacaccagagcaggtgaagaagaaagaaaaatacaatggt
aaaggttctagagctgatgaaaatagcacaaacaaatcttcacatcaagaaaaaaatgtg
gataataagaaagaaaccagcaagaaaaagactgagaaaaagcagtcagaagatattggc
aaagtgtctgggaaaaaacggaggtatttcagtgatagcgatgacgattttgatgttaag
aaaatgaagacctctccaaagcagatggacaactccagagaacatgacaaaaaatctatt
agcaaaaaagacaaggacaaaaagtctgttagcaagaatgataaggagaaaactatggaa
aaaaagaaagagaagttgaataaaagtcaggaggaagctggcaaagaaaagtcaagggtg
gcatcaaaggagaaatcagcaagaattggtaaagaggaaatggtaatgtatgttgatagc
gatgttgacagtgattcttcacctttaaagaaaacctccaagaagaaagataagaagaaa
aatattaagatttcaagtgaagaggagaaagaagaatcagatgatgatgtgtctcgaaga
attatcaaaaaaggaaagaaaaagaagaagaaacacagttacagaatatctgattctgat
tctgaagaagaagttaaagtgaagaaacccagagagaaaaaaccaaaaaagagacagcct
atgttctgtgaatcagatgaagatgatggaatgaaatcttcaatcaaaactttcttcaaa
cctcagtctcaaaatgagaaaccaacttcatcaaaaaatgcaaagtctccagcaaaaaga
gaagcagtgagcagtgcagatttctttggttcttctgtagttgaaagaacagaaaggaaa
gtaactattaaggaaaagaatgaagtggatgaatcttttgaagacgaatttcatgatgat
gatgatttcctggcaaccttggctcagcttgatgaagaaattcctgttaacaaaaaggct
aaaggcaaaacacctgagaaaaaagcagttacacctcagaaacacacaccttcgaaaata
acttctagctgttctgtcactccaaagaaaagtgttacactcagtaaagtgacaccagaa
aaaagactcacaccaagacgaggaacaccagaaatgacagttacatattgcaaagatact
cctgaaagaacttccaaacaacttactccttctaaatcagccacttcttcaagtagtcct
ggcaacagtcttactagtaaattggctgccaaaatgaaagaaaagaaagaagaaccagtc
agagcctcaccaaaaacaccaaccaaaactcccagtcaaaaacctaaagttaacattcca
gaaacacccacaccaaatcctgcagacaggaaaacctcatacctgtcatatctgaacaga
gaagggcctcagcatcttggatctaaagaaattccaacgggagctgagaactgtttggag
ggcttaacgtttgtaatcactggagttttagactcaattgaaagagatgaggcaaaatct
ttaattgagcggtatggtggtagagtaacactttcactgagccgcaagacaaattatttg
attgttggtcgagaacctggtcaaactaaaatacagaaagcaagcagcttgaaaacacca
cagattgatgaagacggtttgcttgatctaatccgcagtaaaccaggcaaaaaatctaaa
ttccttatcgatgcagaaaaaacagtgaaaaaagaaaacttggaagcaaagaaaaacgaa
aaagaaagtaatgttagtggtgtgaaacgtaatgttaaaagcccattaaaagccagttgt
gtgccttctacctcagattctgccaaagaaacaaagccagacacaacaaatattcccaaa
actccttcagatacatcactcctttgggtggacaagtacaaacctagcacgttaaaacag
ataattggtcaaaatggtgacaaaagcaatgcaaagaaacttttcaattggatcagtaac
tggcatgcaaaccgtgcggcaggaatcaaacctcaaccaaatcgattctatcgtggaaat
gataatggtgcaggttcaaaggcagcccttctctctggtccacctggcattggcaagaca
acaactgctcatgttgtctgtaaggaagctggtttttcacttgttgaaatgaatgcatca
gacacacggaacaaatcttctctcagtgaagaactagcaactttactgaagaatacatcc
ttagttgattattgtggaactgagagatcatcctcaaatggctttaaacattgtgtgata
atggatgaagttgatggaatggctggtaatgaagatcgtggaggtgttgcggaattgatc
caattggtgaaaactaccaaaataccaattatatgtatatgtaatgatagacaacaccag
aaaatccgttcccttgcaaatcactgttttgatttgagattccagcgtccacatatggca
caaataaaggctgccatgatgactattgcatacaaagaaggccttcagattaacccaggt
gcattaaatgagataatttcagcttctaatcatgatattcgacaggtcatccataatttg
ttcatgtggagttcatctaataagaatatatcatatgaagatgccaaaagcaatgcagaa
atggctaagaaggatataaaacttaatccttttgatgtgtgtcggcaagtctttgctggt
ggtgagaagaaaatgtcctttatagacaagtcagatttatttttccataattatcaacta
gcacctttgtttgtgcaagaaaactatgcatctgttgagccgtttgcaggaagaggaaac
acagcgaaacatttgtctctgttagcacatgcagccaacagtatctgtgatggagatatt
gttgaaaagctcatacgccaaagacagaactggagtctacttccggtagaggctgtatac
gctagtgttttgcccggtgaatatatgagaggcagtgttaactatatggtgtctttccca
agttggcttgggaaatactcatctcagaacaaaaaccaacgtatcttacaggaacttgga
ggtcacatgaaactaaatatttcagcagacctaagaggtctcaacctggattatctacca
tgtcttcagcaacacctcgtgaaacctctacaagagcaacaaaaggagggtgtacctgaa
gtcattgcattgatggacaaatatgatttacttaaggaagactatgacaatataatggac
attaccaagtggcctaattctaaggattacaccaaaagcctcactactgctaccaaggcg
gcattcacacggagttataacaaagaatctcatctgaccccatatgctactggaacagtg
tcaaagaagcgtgccaaagctgaatcagcaggtgatgatgtatttggtgatggaagcaca
atagaccaaacatctgacagagaagatgctgattctgatggtgatgttactaaagatact
atgattaagaagtctgcaaacaaaagttctgagaagacggatgttagtaaaggaaaggga
aaaggaaaagggaaaggaaaagggcagtctaaaagctcattgtag
DBGET
integrated database retrieval system
