Octopus sinensis (East Asian common octopus): 115209890
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Entry
115209890 CDS
T07665
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115209890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115209890
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115209890
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
115209890
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
Motif
Other DBs
NCBI-GeneID:
115209890
NCBI-ProteinID:
XP_029634333
UniProt:
A0A6P7S8B4
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Position
LG3:97655491..97687254
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AA seq
292 aa
AA seq
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MADIRLASSSVRTKNKFQPSVENLVTPGDVITSDTCFMRGHGTYTADDRLHASVAGVVER
VNKLICVRPLKTRYNGEVGDVVVGRIIEVGQRRWKVDTHSKLDSVLMLSSVNLPGGELRR
RSEEDEKMMRHYLKENDLISAEVHSVFSDGSLSLHTRSLKYGKLSQGSLVTVSPSLVKRR
KTHFHNLPCGAHIILGNNGYIWIAPISPEEDEESGGGYEQNLSPVSCGDREVIARMRNCI
LALSHHKMMLFDTSILYTYDNSLKFSCKDILKPEIMNEVVEMTRLRLEQETL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggctgacatcagactcgcgagttcatctgttcggacaaaaaacaagtttcagccttca
gttgagaacttggttactccaggagatgttattacatcagacacatgtttcatgagagga
catggtacctacacagcggatgaccgacttcatgcttcagtggctggtgttgtagagaga
gtgaataagttgatctgtgtacgtcctttgaaaacgaggtataatggtgaagttggagat
gttgtcgttggtcgaatcattgaagtaggtcaacggcgatggaaagtggacacccattcc
aaattggattctgttttgatgctgtcttctgtaaatttacctggaggagaattgagacga
aggtcagaagaagacgagaagatgatgcgacattacttgaaagagaatgatctcatcagt
gctgaagtacattcagtgttctctgatgggtccttgtctttacatactcgcagtctcaag
tatggcaagctgagtcaaggttcattagtgactgtatccccatcattggtgaagcgccga
aagactcatttccataatttaccatgtggtgcacacattattcttggaaacaatggttac
atctggatagccccaatctctccagaggaggatgaagagtctggtggaggttatgaacaa
aatctgtctccagtttcctgtggtgaccgagaggtgattgctcgcatgaggaactgtatc
ctggccctcagccatcacaagatgatgttgtttgataccagcatattgtatacctatgat
aactccctgaaattctcatgtaaagacatcttgaaaccagaaataatgaatgaagttgtt
gagatgacacggttaaggcttgaacaagaaactctttga
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