Octopus sinensis (East Asian common octopus): 115210302
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Entry
115210302 CDS
T07665
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115210302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115210302
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115210302
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
115210302
NCBI-ProteinID:
XP_029634684
UniProt:
A0A6P7S8M7
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Position
LG4:complement(105916090..105975675)
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AA seq
572 aa
AA seq
DB search
MLSSNGLTIDQWFYYEVHRWRCGASIWWSSVIAIMVSLAYIVITYFLQLSDYFGAYFTLR
ALCFTILAVSLHAILAVYNSLHYTVVPQISTTRLSNVLEFFRIQYILQGFIYTISSMLIT
VFASWIMKDSFSTLAVPCSEDSPAIYLNDNKLFLLTAAIYHGLLFHLRFYRNQYNYTPFK
IIQQAKFFQVKSQLVPVLFESAAQIFKQLLGFYLIFYFLGHLPRDLTAHLCRLSICPETS
LSSVQSLLQPELFLQSFFLGTYMYFIWHLAAVLLRTYLTESYEFRIEPGLDHLSDKCLHN
ALSCKSNPWIQYLGFLDLFQLSRFSFNRRQVLFSATFPGCHPKNWSQIYHICLENLRQLK
DATQEFNHNAFVQAAIPQQNTPNWLHNSSLSASRYLKPTSLGHMSLNESVTGTSLREERP
IKVSLQTKILEVLKKKPVFGYFLRELPDAAPRKLFSSVQIHIWAVEALSRLVAASYAEDT
LGIVQQNLPEILNVLVSLYENVERHFKLTSTLGRRSLTGVNCSHDLALRHAFRSALKSAI
YRIVDTFGKCVIDFRLSLETQRRLKLFLEYKE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgttatccagcaacgggttaacaatagaccagtggttctattatgaggtgcatcgttgg
cgatgtggtgccagtatttggtggtcttctgtcatagcaatcatggtctcactagcttat
attgttataacatattttcttcagctgtcagattactttggagcctatttcactctaaga
gctctctgttttactatacttgctgtctctctgcatgccatattggctgtctataattca
cttcactatacagtggttcctcagatatcaacaaccaggcttagtaatgtcttggagttc
tttcgcatccaatatattctccagggatttatctacaccatttccagtatgctcatcaca
gtatttgcttcatggataatgaaggactctttctccacactggctgttccctgttcagaa
gatagccctgccatctacctgaatgacaacaaacttttcttgctgactgcagccatttat
catggattgttgttccatctaaggttttatagaaatcagtacaactatacacctttcaaa
attatacagcaagccaagttctttcaagttaaaagtcaactagttccagtattatttgaa
tctgctgctcaaattttcaaacagctgctaggtttttatctgatattctactttcttgga
catcttccccgagacttaactgctcatctctgtcgcctctcaatctgcccagaaacaagt
ttgtccagtgttcagagtcttcttcaaccagagttgttcttgcagtcatttttccttgga
acctacatgtatttcatctggcatttagctgctgttttactaaggacatatttaactgag
agttatgaatttcgtatagagcctggtttagatcatctatcagataaatgtttgcacaat
gctcttagctgtaagagcaacccttggattcagtacctcggctttctagatctcttccaa
ctgtccagattctccttcaatagacgtcaggttcttttcagtgcgacttttccagggtgc
caccctaaaaactggagccaaatctatcatatatgtttagagaacctacgtcaactcaag
gatgctacccaagaatttaaccacaatgcatttgtgcaggcagccattccacagcaaaac
acacctaattggttgcacaactcaagcctatctgcaagtcgctacctcaagccaacatct
ttgggccacatgagtcttaatgaatcagtaactggtacatctctccgtgaagaaagacct
ataaaagtcagcttacaaactaagattttagaggtgttgaaaaagaagccagtgttcggt
tattttctacgagaactaccagatgctgcacctcggaaattattctcctcagttcaaatc
catatctgggcagtagaagctttatcccgattggtagcggcttcctacgctgaagataca
cttggtattgtacagcagaacttaccagagatacttaacgttttggtctcactctatgag
aacgtggaaagacatttcaaactgacatcaactcttggacgtcggagccttactggtgtc
aactgttcccatgacttggctctgcgacatgccttccgttctgctttgaagtctgccata
taccgaattgttgacacatttggaaaatgtgtcatagatttccggcttagtctcgaaacc
caaagacgcctcaagttatttctagaatacaaagaatga
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