KEGG   Octopus sinensis (East Asian common octopus): 115210617
Entry
115210617         CDS       T07665                                 
Name
(RefSeq) DNA repair endonuclease XPF isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
osn  Octopus sinensis (East Asian common octopus)
Pathway
osn03420  Nucleotide excision repair
osn03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:osn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    115210617
   03460 Fanconi anemia pathway
    115210617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osn03032]
    115210617
   03400 DNA repair and recombination proteins [BR:osn03400]
    115210617
DNA replication proteins [BR:osn03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    115210617
DNA repair and recombination proteins [BR:osn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115210617
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 115210617
NCBI-ProteinID: XP_029635079
UniProt: A0A6P7S9R0
LinkDB
Position
LG4:complement(163074163..163135239)
AA seq 873 aa
MPLLEYEKEIFLNCFHDDGLLIMSQGLGLERILINLIKVYCDPGNLVFVLNNNNVEEDYI
CDRLKSDGVKEIPKVVTNEFTAPNRQKIYTEGGVLFVTSRILVVDFLTENIPANLITGII
VCKAHKILDSCQEAFILRLYRQKNKTGFIKAFSDRPSGFTTGFAHVENVMKNLFLKKLFL
WPRFHANVASCLDKHKIEVVELHIQMTSTMVACQTALLDLINSCISDLKRYTSAIDFDEI
TVENAIGKSFDIMIRHQLNPIWNQLSSKAKQIVSDLKTLRMISQDLTQYDCVTFFSVVNS
ICTSEKTFGENSGWLFLDSADSLIVNSKMRVYKTNKSSKKKEDSKLKGVASENRENENVP
DLEIPPKWTGLSEILAEIQNENAELDPDFGRGKILIVAEDDRTCSQLREFLSKGGKNTLA
SLYNRYLASKGKYMEVTSPKKKKQKLTKTKPTKEATLVELTEMEPEEIASRLNTEEESNE
EENFRCSSQDAYYGILSQPAVIIHPIHGGSDSLGLQRTLWEINPHYVILYDSCMKFVREL
EVYHATRPHVPLRVYFLIYSNSVEEQQYLTTLRKEKEAFEFLIKEKALMVIPEERDGKLE
NDPNLHAVSALQAPTSSRKGGMEVKAENHKIIVDMREFRSELPSLLHRRGIHIEPITLEV
GDYILTPDICVERKSISDLIGSLSNGRLYNQCVSMSRHYKRPVLLIEFDTNKYFSLNKYQ
LDNDVSIRDNTSRLALLTLHFPNLRILWCQNPYATAELFHELKVGREQPSASAAVAVSET
TDYIDKYNPKPQDFLLKLPGVNLKNYRLIMNKVTNIYELSQLTEEELTKILGNASNAQQL
LRFLRSKADGLHQVGLFSAPSKPEKKRPFKRKL
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgccgctcttggaatatgaaaaagaaatatttttgaattgcttccacgacgatggatta
cttattatgtcacagggccttggtcttgaaagaatattgataaacctaataaaagtctac
tgtgaccctggaaatcttgtctttgtgctgaataataataatgtggaagaggattacatt
tgtgatcgtctaaagtctgatggtgtgaaggaaatacctaaagtcgtaacaaatgaattc
actgcaccaaacaggcagaaaatttacacagaaggaggtgtgttgtttgtgacttcacgg
attcttgtcgttgactttctcacagaaaatattccagccaacctcatcacaggcattatc
gtctgtaaagctcacaaaatcttggattcatgccaggaagcttttattctcagactttac
cgacagaaaaacaaaactggttttatcaaggccttttctgaccggccttctggtttcaca
actggttttgcccatgttgaaaacgtaatgaaaaatctttttctcaagaaactgttcttg
tggccacggttccatgctaatgttgcaagctgcttggataaacataagatagaggttgtt
gagctgcacatccagatgacgagtacaatggttgcttgccaaacggcccttcttgatctt
attaattcctgcatctctgatctcaaaagatatacctctgccattgattttgatgagata
acagtggaaaatgcgattggcaagtcctttgatattatgattcgacatcaactgaatcct
atttggaaccagctcagcagcaaagccaagcagattgtctctgatctcaaaaccttgagg
atgattagccaggatttgacccaatatgactgtgtcacattttttagtgtggtgaattct
atttgtacaagtgagaaaacatttggggaaaattctggttggctttttctggactcagct
gatagtctgattgtgaactcaaagatgagggtttacaaaactaacaaaagctctaaaaag
aaggaagattctaaactgaaaggtgttgcatctgaaaacagagaaaatgagaatgttcca
gacttggaaatcccacccaaatggactggtttgtcagaaatcctggctgagattcagaat
gagaatgctgaactggatcccgactttgggagaggaaaaatcttaattgtagctgaagat
gaccgaacttgtagtcaactgagggagtttttatcaaaaggtggaaagaatactctagct
tctctctacaacagatatttggcttcaaaaggcaaatatatggaagttacatctccaaag
aagaagaaacaaaaattaacaaaaacaaaacctaccaaagaagcaactttagttgagttg
acagaaatggagccagaggagatagcttcaaggttaaacactgaagaggaatccaatgaa
gaagagaatttcaggtgttcttcgcaggatgcttactatggaatcctttcacaaccagct
gtcataatccatccaatccatggtggctctgattctcttggattgcagcgtactctctgg
gagataaacccacattatgtaatcctgtacgattcctgcatgaagtttgtgagagaactg
gaggtctatcatgctacaaggccacatgttcctttacgggtctacttcttaatatatagc
aattctgttgaagaacaacagtatctaactactcttcgtaaagaaaaagaagcctttgag
ttccttatcaaagaaaaggctctaatggtaatcccagaagagagagatgggaagcttgaa
aatgatcctaacttgcatgcagtttctgcactccaagcccctacttcttctcgtaaagga
ggaatggaagtgaaagcagaaaatcacaagatcattgttgatatgcgtgaatttcgcagt
gaactaccttcattgttgcatcgacgaggtattcatatagaacctattacgttagaggtt
ggagattacattttgacccctgacatctgcgttgaaagaaaaagcataagcgatttgatt
ggttcactcagtaatggacgtctgtacaaccagtgtgtttccatgagccgacattacaag
cgaccggttcttcttatagagtttgataccaataaatatttttcattaaacaagtaccag
ttggataacgacgtctccattcgtgacaatacctcacgccttgctctcctcactcttcat
tttccaaatctccgaatactttggtgtcaaaacccttatgcaacagctgaattgtttcat
gaattaaaggttggaagggaacagccttctgcctctgctgccgttgctgtgagtgaaaca
acagactatattgataaatacaacccaaaacctcaggactttcttctgaaattacccgga
gtcaatttgaaaaactatcggcttattatgaacaaagtgacgaatatttatgaattgagt
cagctgactgaggaagaactgacgaagattttgggcaatgctagcaatgcacaacagttg
ttaagatttctaaggtcaaaagcagatggtttgcatcaggtaggccttttttcagcgcca
agtaaaccagagaaaaaacggccatttaaaagaaaattatga

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