Octopus sinensis (East Asian common octopus): 115210934
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Entry
115210934 CDS
T07665
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115210934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115210934
Spliceosome [BR:
osn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115210934
Complex C
U5 SnRNP specific factors
115210934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_PRP39_C
Suf
TPR_17
TPR_2
HAT_Syf1_CNRKL1_N
TPR_8
FAT
TPR_1
ARM_TT21_2nd
TPR_CcmH_CycH
Iml2-TPR_39
NatA_aux_su
TPR_9
ChAPs
TPR_21
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
115210934
NCBI-ProteinID:
XP_029635582
UniProt:
A0A6P7SBZ9
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All DBs
Position
LG4:complement(12792168..12844218)
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AA seq
932 aa
AA seq
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MAVQSLVSKKKKSFIGLPAPLGYVPGLGRGATGFTTRSDIGPARDADDISDDRHAPPNKK
KKDDKDDDDDEDLNDANYDEFAGYGGSLCSKDPYDKDDEEADAIYDAIDKRMDEKRKERR
EQKLRAELERYRQERPKIQQQFSDLKRELASVSYDDWMNLPEVGDARNKRQRNPRADKFT
PLPDSLLADAASSTTSNTSVDAMQQQYAGLDTPFSDAMSPGFSTPSGDIDMKKIGQARNT
LMDIKLTQVSDSVSGQTVVDPKGYLTDLQSMLPSHGGDINDVKKARLLLKSVRETNPKHP
PAWIASARLEEVTGKVQAARNLIMKGCEECPKSEDVWLEAARLMPGDQAKAVVAQAVRQL
PLSVRLFIKASDLETELKAKKRVFRKALEQIPNSVRLWKAAVELEDVDDARIMLSRAVEC
CPTSVELWLALARLETYENARKVLNKARENIPTDRQIWITAAKLEEAQGNEHMVEKIVDR
ALHSLKANMVEINREQWIKDAEDCEKANSIHTCQAIVRAVIGVNVEEEDRKHTWMEDAES
CALHNAYECARAIYSHALAVFPSKKSIWLRAAYFEKNHGSRESLEVLLQRAVAHCPKAEV
LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLQKAR
ASAPTPRVMMKSVKLEWCLGEIDNAKLLLEEAVKHYPDFAKLWMMKGQIEEQRGNINIAR
EAYNQGLKKCPNAIPLWLLLSRLEEKAGQLIKARSILEKARLKNSHSPDLWLEAIRVENR
ASLKNIAQTLMAKAKQDCTSAGILWAESIFMEPRPQRKTNSVDALKRCEHDPHVLLAVSK
LFWTERRITKAREWFNRTVKIDPDLGDAWAYFYKFESIHGTEDQKEDVKKRCINAEPRHG
EQWCKVSKDIANWRLKTSEVLLLTSGAIPIPN
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcagtcgcttgtcagtaaaaagaagaaaagttttattggtttaccagctccg
ctcggatatgttccaggcttaggacgtggtgcgactggatttactactcgttctgatatc
ggtccagctcgagatgcagatgacatttccgatgatcgacatgcaccacccaataaaaag
aagaaagatgataaagatgatgatgatgatgaagatttgaatgatgcaaattatgatgag
tttgctggttatggcggcagtttatgcagcaaagatccatacgataaagatgatgaagaa
gcagatgcaatatacgatgcgatcgataaaaggatggatgagaaacggaaagagcggcgt
gagcaaaaactgcgtgctgaattggagcggtaccgtcaggagcgacccaagatccaacag
cagttctctgatctcaagagggaattggccagtgttagctacgatgactggatgaatcta
cctgaagttggtgatgctagaaacaaacgacagcgaaacccaagagcagacaagtttaca
ccattaccggacagtttattagcagatgctgcatcctctacgacatcaaacacatcagtt
gatgctatgcaacagcaatatgccggccttgacacaccatttagtgatgccatgtcacca
ggcttttcaactcctagcggtgacattgatatgaagaaaatcggtcaagcccgtaacacc
ctgatggacattaaactaacccaggtatcagattcagtgagtggtcagactgtcgttgac
cccaaaggttacttaaccgacctccagtctatgctaccctctcatggtggagatatcaat
gatgttaagaaagctcggctgctgctaaaatctgtcagagagacaaaccccaagcatcca
ccagcatggattgcctcagcacgtttggaagaagttactggaaaagtgcaggcagccagg
aatcttatcatgaaaggatgtgaagaatgtcccaagagtgaagatgtatggttagaagct
gccagactaatgcctggtgaccaagcgaaggccgtagtggctcaagcagttcgtcagttg
cccctgtctgtcagacttttcattaaggcttcagatctggaaactgaattaaaagctaag
aagagagtttttaggaaagctttggaacaaattccaaattctgtccgtctttggaaggct
gcagtggagcttgaagatgttgatgatgcacgtattatgttgagtcgagctgttgaatgt
tgccccaccagcgttgaactgtggttggctctcgctcggctggaaacttatgagaatgcc
cgtaaagtgttgaataaagcacgtgaaaatatcccaacggacagacaaatctggattact
gcagcaaaactagaagaagcccaggggaatgaacacatggtggagaaaattgttgacaga
gcacttcactccctgaaagccaacatggtggagatcaacagagaacagtggatcaaagat
gctgaggactgtgagaaggccaacagcatccacacatgtcaggcaattgtccgtgctgtg
attggagtcaatgttgaggaagaggacagaaaacacacatggatggaagatgctgagtca
tgtgcattacataacgcatatgagtgtgccagagctatctattcccatgctttggctgtg
ttccccagtaagaaaagtatctggctaagagcagcgtattttgagaagaaccatggatca
agagagtcgttagaggtcctgttgcaaagggcagttgctcattgtcccaaagcagaagta
ctctggctcatgggagccaaatcaaagtggcttgcaggtgatgtgccagctgcacgaagt
atcttggctctggcatttcaggccaacccaaacagtgaagaaatctggttggctgccgtc
aaactggagagtgaaaacaatgaatatgaacgtgctcggcgtttgctacagaaggctcgt
gccagtgcaccaacacctcgggtgatgatgaagtcagtgaagctggaatggtgtcttgga
gagattgacaatgccaagctattgctggaagaagctgtcaaacactaccctgactttgct
aagttgtggatgatgaaaggtcaaattgaggaacagcggggtaacataaatattgccaga
gaggcttacaaccaagggttaaagaaatgcccaaatgccataccgctttggttgttactg
tctcgactggaggaaaaagccggtcagctgattaaagcccgttccatcctggagaaggcc
agattaaagaattctcattcaccagatttatggttggaagcaatccgtgttgagaaccgt
gcctccctaaagaacatagcgcagactcttatggctaaagccaaacaagactgtacaagt
gcaggaatcctgtgggcagagtccatcttcatggaacctcgtccccagcggaaaaccaat
tctgtcgacgccctcaaaagatgtgaacatgaccctcatgtcttgcttgctgtctccaag
ttgttttggacagaacgaagaatcacaaaagctagagaatggttcaacagaacagtaaag
atcgaccctgatctaggcgatgcctgggcttatttctataaatttgaatccatccatggc
actgaggatcagaaagaagatgtcaagaaacggtgtatcaatgctgagcctcgtcatggt
gaacaatggtgtaaggtatcgaaagacattgctaattggcgcctgaaaacctcagaggtg
ttattgctgaccagtggtgcaattcctatccccaactga
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