Octopus sinensis (East Asian common octopus): 115211678
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Entry
115211678 CDS
T07665
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osn03009
]
115211678
03036 Chromosome and associated proteins [BR:
osn03036
]
115211678
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115211678
Ribosome biogenesis [BR:
osn03009
]
Eukaryotic type
Pre-60S particles
Helicases
115211678
Chromosome and associated proteins [BR:
osn03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
115211678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
ERCC3_RAD25_C
CMS1
Cas3-like_C_2
GRP
DUF4800
Motif
Other DBs
NCBI-GeneID:
115211678
NCBI-ProteinID:
XP_029636179
UniProt:
A0A6P7SCQ1
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All DBs
Position
LG5:complement(40441174..40487885)
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AA seq
641 aa
AA seq
DB search
MTAKSSDDPKEKLKKNENKTNMNGNASSASDSDKVDPQVEIGAFGNFRISDTSIQKLKAN
DINYLFPIQSQTFDYVYDGHDVIAQARTGTGKTLSFVLPLVEKLIKKKKTKEGRMPRVLV
LLPTRELAKQVYEDFLKVCGELSAFCFYGGVPYEPQERALWKGLDILVGTPGRILDHIQK
GNMSLQKAKHVVLDEVDQMLDMGFAESVDEILKVAYDKEDEGHKPQTLLFSATLPPWVYR
TAQKYMKKDVKKVDLIGQQQIKTSTTVQHLAIKCSIQDRNSIIADIIQVYSGNHGRAIVF
CQTKKQADELAVSASMKLDAHVLHGDIPQDKRELVLKSFRDSKYKVLLTTDVAARGLDIP
EVDLVVQCSPPKDTDAYIHRSGRTGRAGRSGISVLFYSPRQESDLMQVERRAGVNFKRIG
PPTTVDIIKTYAKDAARSLDNVPDETLDYFRDSANILIEERGAENALAAALAVISKSTKI
ISRSLLSAKEGYVSFVLRTNTEIRSPGYLLNCLERQVPEMSYKVGEIRLTKDKKGGVLDV
PADMVRLLEMKWLNSKHESLEKATELPELIEDNNAMRNGRRGYGGGGGGGGGGGGYGGGW
GRDRNSRGGGGGGFNRGRRPDWRNNRFDNHGGPPKKRFRFD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgaaatctagtgatgatccgaaagagaaactcaagaaaaacgaaaacaaaacc
aatatgaatggaaatgcgtctagtgcatctgatagtgacaaagttgatccccaggtggaa
attggtgcttttggcaatttccgtatttctgacacctctattcaaaaattgaaagccaat
gatatcaattatctttttccaattcaatcacaaacttttgattatgtctatgatggccac
gatgttattgctcaagcacgaactggcactggaaaaacactttcctttgttttgccactg
gtagaaaaactgattaaaaaaaagaaaacaaaagaaggtcgaatgcctagggtattagtc
ttactcccgactcgagagttggctaaacaggtatatgaagatttcttaaaagtctgtgga
gagctttctgccttttgcttttatggtggagtaccatatgaaccacaagagcgtgcattg
tggaagggcctggacatcttggttggcacaccaggtcgtattcttgatcacatccagaaa
ggcaatatgtctttgcagaaagctaaacatgtcgttttggatgaagttgaccagatgttg
gacatgggctttgctgaatctgttgatgaaattttaaaggttgcttatgacaaagaggat
gaaggacataaaccacagacgttactgttttctgcaactctgccgccatgggtgtataga
actgcccaaaaatacatgaaaaaagatgttaagaaagttgatttgattggccagcaacaa
ataaagacttctacaactgtacagcaccttgctatcaaatgtagcattcaagaccgtaac
agtattattgctgatataatccaagtgtacagtggtaatcatggccgtgccattgtgttc
tgtcaaacaaaaaagcaagctgatgagcttgctgttagtgcttcaatgaagttagatgct
catgtgttgcatggtgacattccccaagataagagagaacttgtccttaagagcttccgc
gatagtaagtacaaagttcttctaacaactgatgttgctgcaagaggcttagatataccg
gaggttgatttagttgtgcagtgtagtccaccaaaagatacagatgcctatatacatcgc
tctggaagaacaggacgtgctggccgttcagggataagtgttttattttattcaccgcgc
caagaaagtgaccttatgcaagttgaacgaagagctggtgtcaattttaagcgaattggt
ccaccaaccacagtagatatcatcaaaacgtatgctaaagatgctgcaagatctttagat
aatgttcctgatgaaactttagattattttagagactctgccaatattcttattgaggaa
cgaggagctgagaatgctcttgccgcagcacttgcagttatttctaaaagcacaaaaatt
atttctcgatcacttttaagtgctaaagagggttatgtatcttttgttttgcgaaccaat
acagaaattcgttccccaggctatctgttaaattgtttggagcgacaggtgccagaaatg
tcctataaagtcggagaaattcgtttaacaaaagacaaaaaaggtggtgtcctagatgtc
ccagcagatatggtgcggcttttggaaatgaaatggttaaactcaaaacatgaatcatta
gaaaaagcaactgaactgccagaactaatagaagacaacaacgcaatgaggaatggaaga
cgaggctatggaggtggaggaggaggaggcggtggtggcggcggttatggaggtggctgg
ggacgtgacaggaactctagaggcggtggcggtggtgggtttaacagaggccgcagacca
gactggagaaataatagatttgataatcatggaggtccacccaagaaacgcttcagattt
gactaa
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