Octopus sinensis (East Asian common octopus): 115211822
Help
Entry
115211822 CDS
T07665
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115211822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115211822
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
115211822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
115211822
NCBI-ProteinID:
XP_029636389
UniProt:
A0A6P7SDA9
LinkDB
All DBs
Position
LG5:complement(117978836..118095655)
Genome browser
AA seq
265 aa
AA seq
DB search
MAHQTPKMPTYPRSGWPKAGGVSGSQHGSAKYGNITLSPSSITLERTINLYPLTNYTFGT
KEPLYEKDSSVPARFQRMREEFEKIGMRRSVEGVLIVHEHGLPHVLLLQLGTTFFKLPGG
ELNPNEDQVDGLKRLLTEWLPMRGSTAQSYSDNTEESREITAKKKTLGRQDGAPMDWVIE
DTIGNWWRPNFEPPQYPYVPAHITKPKEHKRLFLVQLPEKALFAVPRNYKLVAAPLFELY
DNAAGYGPIISSLPQALSRFNFIYN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggctcatcaaactcctaaaatgccgacgtaccccaggtctggttggccgaaggctggc
ggcgtgagtggttcgcaacatggttcagcgaaatatggaaacataacgctctctccttcc
tcaattactctcgaaagaaccatcaacttatatcctctaactaattatacattcggtaca
aaagaaccactttatgaaaaggacagctctgttcctgcaagattccaacgaatgcgagaa
gaatttgaaaagattggaatgcgtcggtctgttgaaggtgtcttgattgttcatgagcac
ggtttaccacatgttcttcttttgcagttaggaacaacattttttaaactgccaggtgga
gaactaaatccaaatgaagaccaagttgatggactgaaaagactgctaactgaatggtta
ccaatgaggggatctacagcacagtcgtacagtgacaacacggaggaatccagggaaatc
acggctaaaaaaaaaacacttggtcgtcaggatggtgcccccatggattgggtaattgag
gatacaattggtaattggtggcgaccaaattttgaacccccacaatatccttatgtacca
gctcacataacaaaacccaaagaacacaaaagactatttttagttcaacttcctgaaaaa
gctttgtttgctgtgccacggaattataaacttgttgctgctcctctctttgaattatat
gacaatgctgctgggtatggccctattatttccagtctacctcaagctctaagtcggttc
aactttatctacaactga
DBGET
integrated database retrieval system
