KEGG   Octopus sinensis (East Asian common octopus): 115211926
Entry
115211926         CDS       T07665                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
osn  Octopus sinensis (East Asian common octopus)
Pathway
osn03020  RNA polymerase
osn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:osn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115211926
  09124 Replication and repair
   03420 Nucleotide excision repair
    115211926
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osn03021]
    115211926
   03400 DNA repair and recombination proteins [BR:osn03400]
    115211926
Transcription machinery [BR:osn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115211926
DNA repair and recombination proteins [BR:osn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115211926
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta DUF5886 DUF3716 DZR
Other DBs
NCBI-GeneID: 115211926
NCBI-ProteinID: XP_029636533
UniProt: A0A6P7SEU0
LinkDB
Position
LG5:complement(62892485..62893340)
AA seq 130 aa
MADKDFFEPTDSGPGFVGIKFCKECNNMLYPKEDKANKILLYACRNCQYQEIADNTCIYV
NRITAEVDEFTQIIGDVIADPTLPRTEDHPCPRCGHRQAVFFQSHSSKAEEGMKLYYVCT
NQQCIHQWTE
NT seq 393 nt   +upstreamnt  +downstreamnt
atggctgataaagacttttttgaaccgactgattctggtccaggttttgttggtatcaag
ttctgtaaagaatgcaacaatatgttgtatcctaaagaagacaaagctaacaaaattctc
ttgtatgcatgtcgtaattgtcaatatcaggaaattgccgacaacacgtgtatttatgtg
aacagaatcactgctgaagtggatgaattcacacagattattggtgatgtaatagctgat
ccaacattgccgagaacagaagatcatccttgtccaagatgcggtcatagacaagcggta
tttttccagtctcatagttccaaggccgaggaaggcatgaaattatattatgtttgtact
aatcaacaatgtattcatcaatggactgagtaa

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