Octopus sinensis (East Asian common octopus): 115213012
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Entry
115213012 CDS
T07665
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115213012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115213012
Spliceosome [BR:
osn03041
]
Complex B
Other components
Prp19-related factors
115213012
Complex C
115213012
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf_CCCH_4
Nup35_RRM_2
Torus
zf-CCCH_2
zf-CCCH
zf-CCCH_3
zf-CCCH_4
RRM_occluded
SpdB
RRM_3
Motif
Other DBs
NCBI-GeneID:
115213012
NCBI-ProteinID:
XP_029637769
UniProt:
A0A6P7SH81
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All DBs
Position
LG6:33818429..33834055
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AA seq
437 aa
AA seq
DB search
MATSKSANTYNRQNWEDSEFPVLCQTCLGDNPYIRMMKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNICQTCLLDLDYGLPVQVRDAALKLQDNIPKSDVNKEYYTQN
IEREINNSDGTTAAGALAKATAPSDMLLKLARTAPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPNDPLADQNIKDRYYGLNDPVADKLIKRYATMPKLEPPEDKTITTLYVGNLG
VRIAEKELRDHFYQFGEIRSINVVSKQHCAFVQFTSRSAAELAAERSFNKLIILGRRLNI
KWGRSQAQQTLMKKEDIENENLLEPVPGLPGVTLPLPPEELTNNYFNLGQPPPLVPPPPP
QGVPPRIPPPMAPPFNNMPRGPPPPPPGVRLPPPPPGILPVRPPPLIPPRTTQLNSVHYP
SQDPTRMGAVTVTNQKT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccaagagtgccaacacttacaacagacaaaactgggaagattcggaattt
ccagttctctgtcaaacatgtcttggagacaatccttatataagaatgatgaaagaaaaa
tatggcaaggaatgcaagatatgtgcacgaccttttaccgtgtttcgatggtgtcctggt
gcccgaatgaggttcaagaaaactgaagtgtgtcagacttgttccaagttgaagaatatt
tgccagacatgtctcttggatttggattacggtctccctgtgcaagtccgagatgctgct
cttaaactacaagataacattcctaagtcagatgtcaataaagaatactatactcagaat
attgaaagagagatcaataacagcgatggcaccacagcagcaggtgctttagccaaagct
acagctccaagtgacatgttactgaaattggcaaggacagcgccttattataaacgcaac
aggccacacatatgttctttctgggttaaaggagagtgtaaacgtggagaagagtgtcct
tacagacatgaaaagcccactgatcccaatgatccactggctgatcaaaacattaaagac
agatactatggccttaatgatcctgtagctgataagctgatcaagaggtatgcaaccatg
cccaaactggagccacctgaagataaaactatcacaacattatatgttggaaaccttggt
gtccgtattgcagaaaaagaactgagggaccatttctatcagtttggagaaatccgttct
atcaacgtggtcagtaagcaacactgtgcatttgttcagtttacaagccgttctgctgca
gaattggctgcagaacgttcattcaataaactcatcatccttggccgacgtttgaacatt
aaatggggaagatctcaggctcaacagactttaatgaagaaggaagatatagaaaatgag
aatcttctggaacctgtacccggtttacctggggtgacattaccattgccacctgaagaa
ctgaccaacaactattttaatcttggccagccaccaccactggtacctccaccaccacca
caaggtgtacctccccgtattccacccccaatggcaccaccgtttaacaatatgcctcga
ggtccacctcctccaccaccaggtgtcagactacccccaccaccacctggaatactacct
gtgcggccaccgccactgatcccacctcgaactactcagctcaactctgtccactatcca
tcacaagacccgacacgtatgggagcagtaactgtcaccaaccagaagacctag
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