Octopus sinensis (East Asian common octopus): 115213305
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Entry
115213305 CDS
T07665
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115213305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115213305
Spliceosome [BR:
osn03041
]
Complex A
U1 snRNP components
U1 related factors
115213305
Complex B
115213305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
115213305
NCBI-ProteinID:
XP_029638102
UniProt:
A0A6P7SI54
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All DBs
Position
LG1:62619607..62722162
Genome browser
AA seq
914 aa
AA seq
DB search
MAGTNPTSQPQANPLMRAPFGIGPVPPGPAPPGFIPTMVAGGPGPSPDMIKPPPVMPPGI
PPAYTPVPPFVPPRSSSGAVPTRPGVPPRPGIPPPGLPIPPPGFPPTTGMSGTPVSLPGA
LPGSVGQTQTTQQPSSIAASSTTSIECKPAEKKTVWTEHKAPDGRTYYYNSVTKQSSWEK
PDELKTPAELLLSQCPWKEYKSDTGKVYYHNSASKESRWTKPKELEELEAMIVKQELDKK
PVGELGVSLSPNVTSGVPVVSSTSQSSASVVQAPVLVGSTSSATSQVHNTGPPSAIQQAI
QATLASIELPPQPSVVLQQQVQQHQQSATQQAQSAVSSSSTVTSAGSVTPVPQKQTPTQV
VIDGNKTDSSSNSSSEGEDDEKNERKEYIFRNKKEAIEAFKTLLRERDVPSSATWEQAMK
MIINDARYGALKHLNEKKQAFNEYKTQKAKEEKEEQRLRTKQAKEDLENFLLNSDKMNST
VKYWKADNIFGDLDVWKNVCDRDRRELFEDVLHMLAKREKEEAKALRKRNIKVFSEILDS
MPSLTYCTTWSDAQQMLLDNPRFTEDPDLQNMDKEDALICFEDHIRMLEQEYDDEKERER
RRVRRQQRKNRESFQVLLDELHDQGKLNSMSLWMDLYPIVSQDLRFSNILGQPGSTPLDL
FKFYVEDLKSRFHDEKKIVKEILKDRGIIVETSTTYEDFSSCLNTDKRSGNLDSGNIKLT
YNSLIEKAEAREKERLKEEARKIRRLEGAFKAMLKQASPSIDSMTRWEDIRVRLEKEIPF
EAITLESERIRLYKEYQVAVLEQCSHHHSKKKKSKKHKLKRSRSRSRSSESDDDISSRHK
LKKKKKSRSASRSPSYMSESDDQEMERASKRHKKKSKKKKHLSRADWNSSDSDVSEGELE
KRRRHLLQQLEADQ
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtacgaatccaacttcacaacctcaggctaatccattaatgcgagcaccgttt
gggattgggcctgttcctccaggcccagcaccacctggttttatacccacaatggttgca
ggtggtccaggaccaagtccagatatgatcaaacctcctccagttatgccacctggaata
ccaccagcttatacacctgtaccaccttttgttcctccccgttctagttctggagctgta
ccaacacgacctggggtaccaccacgccctggaataccacctcctggattacctatccca
cctccaggctttccacccacaacaggtatgtcaggcactcctgtctctcttcctggtgct
ttacctggatctgttggtcagacacaaaccacccagcaaccatcttccattgcagcttcc
tcaaccacttctatagagtgtaaacctgctgaaaagaaaactgtttggactgaacacaaa
gctcctgatggtagaacatactattataacagtgtaacaaaacagtccagctgggaaaaa
ccagatgaattgaaaactcctgctgaactattgttaagtcaatgtccatggaaagaatac
aaatctgacacaggaaaggtttactatcacaattctgcctccaaagaatctcgctggacc
aaaccaaaggaattagaggaacttgaagctatgatagtcaagcaagaattagataagaaa
ccagttggagaacttggtgtcagcttgagtcctaatgtcaccagtggtgttccagttgta
tcatcaacatctcagtcgtcggcttcagttgttcaggctcctgttttggtaggatctaca
agtagtgctacttctcaagttcataatacaggccctccgtctgcaattcagcaagctatt
caagcaacattggcttctattgaacttcctccacaaccatctgttgtccttcagcaacaa
gtccaacaacatcaacagtctgcgacacagcaagcacagtcagctgtaagtagttcatca
actgttacatctgcaggatctgtgactcctgttccacagaaacaaactccaactcaagtt
gttatcgatggcaataagacagactcatcatcaaacagcagcagcgaaggtgaagatgat
gagaaaaatgaaagaaaagaatatattttccggaacaaaaaagaagctattgaagcattt
aaaactctcctacgagaaagggatgtgccgtcttctgctacatgggagcaagctatgaaa
atgatcattaatgatgcaagatatggggcattaaaacacttgaatgagaagaaacaagct
tttaatgaatacaaaactcaaaaagctaaagaagagaaggaagaacagcgacttcgaacg
aaacaagctaaagaagacctggaaaattttctattaaatagtgacaaaatgaattctact
gtaaaatattggaaagcagataatatttttggtgatttagatgtctggaaaaatgtctgt
gatcgtgatcgacgggaactcttcgaagatgtcttacacatgttggcaaagagagaaaag
gaggaagccaaagccttacgaaagcgtaatattaaagtgttttctgaaatccttgatagt
atgccaagtctgacatactgtacaacatggtcagatgctcaacagatgttacttgacaat
cccagatttacagaagatccagatttacaaaacatggacaaagaggatgcattaatttgc
tttgaggaccatatacgtatgttagaacaggaatatgatgatgaaaaggaacgagaaagg
cggagggtcaggcgccagcaaagaaaaaatagggagagcttccaggttctgttggacgaa
ctgcatgatcaaggaaaattgaattcaatgtcactgtggatggatttgtatcctattgtc
agtcaagaccttcgcttttcaaacatccttggacagccaggttcaacaccacttgattta
tttaaattttatgttgaggatctcaaatctaggtttcatgatgagaaaaagattgtaaag
gaaattctaaaggaccgagggattattgtggaaacgagtacaacatatgaggatttttct
tcgtgtttaaacacagacaaacgttctggcaatctggactctgggaatatcaagttaact
tacaatagtctcatagagaaagctgaagcacgagaaaaagaacggttaaaagaagaagca
agaaaaatccggaggcttgaaggtgctttcaaggccatgttaaaacaagctagtccgtca
atagattctatgacacgttgggaagatatacgggtacggttagaaaaagaaattccattt
gaagcaataactcttgaatctgaacgaattcgattatacaaggagtaccaagtagcagta
ttagagcagtgttcacatcaccattctaagaagaagaaatccaaaaagcacaaactaaag
cggtctcggtcaagatctcgatcgtctgaatcagatgatgacatttcatcccgtcataaa
ttgaagaaaaaaaagaaatctagatcagcctctcgctcaccaagttatatgtctgaatca
gatgaccaagaaatggaaagggcatcgaaacgacacaaaaagaaatccaaaaagaaaaaa
catctttccagagctgactggaattcatcagacagtgacgtcagtgaaggggagttagag
aagcgacgacggcacctgctgcagcagctagaagctgaccaataa
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