Octopus sinensis (East Asian common octopus): 115213351
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Entry
115213351 CDS
T07665
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osn03009
]
115213351
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115213351
Ribosome biogenesis [BR:
osn03009
]
Eukaryotic type
Pre-60S particles
Helicases
115213351
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Helicase_C_2
zinc-ribbons_6
Motif
Other DBs
NCBI-GeneID:
115213351
NCBI-ProteinID:
XP_029638149
UniProt:
A0A6P7SIC9
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Position
LG6:66176599..66209112
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AA seq
584 aa
AA seq
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MDDTWDKLSLSEASCAALKDLKFVKMTPVQAACIPMFLQNKDVATEAVTGSGKTLAFVIP
IIERLQKHEQPWKKHEIAAIVLTPTRELAIQIEEVLLVFLRHLPQFTSCCMIGGTSVQLD
IEKFQEHGGHIIVATPGRLEDILDRQAKTLNFASYVKSLEVFVMDEADRLLESGFEASLN
TILSYLPKQRRTGLFSATQTDEVEKLIRAGMRNPVRISVKEKQTSAHMVQRIPSTLSIFY
MICESDEKFNQLVHFLREHKNDKVMVFLSTCAAVDYFCGALKLILKKHVILGIHGKMRKK
RNNIFARFRKQQSGILMCTDVMARGVDVPEVHWVFQYDPPSSASAFVHRSGRTARIGNTG
NSLVLLTPSEDAFIEFIARNQKVPMRQFSKSDNVLPAIDKLKRLSEKDRSLYDKSVRAYV
SFIQSYAKHECSMIFRTKDLDFGRLATGFGLLKIPVMPELKGKKIDNFTPSSIDINTIPY
LNKDKEKIRQQRIQEGVEKKSKYKPKTVAWSKKKEKKEIKKKRQETKKSKKKKMTDSGQK
SKLEAAEKSRLEEIKDLQDDYRLLKKQKKGKISEEDFEKQFTES
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggacgacacgtgggacaaattgtccctctcagaggcttcttgcgctgctcttaaggat
ttaaaatttgtaaaaatgacgccagtacaggctgcttgtattccaatgtttctccaaaac
aaagatgtagcaactgaggcagtgacagggagtggcaaaactctggcatttgttataccc
atcattgaacgactacagaaacatgaacaaccctggaagaaacatgagattgctgcaata
gttttgactcctaccagagaactggccatccaaattgaggaggtcctattagtattcctc
agacatttacctcagtttacctcctgttgtatgattggtggtaccagtgttcaattggat
attgaaaaatttcaggaacatggaggtcacattatagtcgcaacccctggtcgcttggaa
gatatactggatcggcaagcaaaaactttgaactttgcatcttatgtcaagtcattggaa
gtctttgtgatggatgaagctgatcggttattagaaagtggatttgaagcgagtttgaat
acaattttaagctatttaccaaaacagcgtcggacaggtcttttctctgcgactcagaca
gatgaagtagagaagctgatccgggctggcatgagaaatccagtgagaatatcagtgaaa
gagaaacaaacctcagcccacatggttcagaggattccaagcaccctgtccatattttac
atgatctgtgagagtgatgagaagttcaaccagttggtgcacttccttagagagcacaaa
aatgacaaagtgatggttttcttgagcacttgtgctgctgtggactatttttgtggtgca
ctaaaattgattttgaaaaaacacgtgattttaggcatccatggcaaaatgcggaagaaa
aggaacaatatttttgccagattccggaaacagcaaagtggaatcctgatgtgtactgat
gtaatggctcgtggagttgatgttcctgaggttcactgggtatttcaatatgacccaccg
agttcagccagtgcttttgttcaccgcagtggaagaactgctcgtattggtaacacagga
aatagtctggtgctgttgaccccaagtgaagatgctttcatagaatttatagccaggaat
caaaaggtgccaatgcgacaattttccaaatctgataatgtccttccggccatcgataaa
ctcaaaagactttctgagaaggacagatccctctatgacaagagtgtgagagcttatgtt
tcttttatccagtcttatgccaaacatgaatgtagcatgatctttcggactaaagatctt
gattttggtcgattggcaacaggctttggcctcctcaaaattccagttatgcctgaactg
aaaggaaagaaaattgacaacttcacgccgtcatctattgatataaacacaattccatat
ttaaataaagataaggaaaagatcagacaacagaggattcaagaaggagttgaaaagaaa
tctaaatacaaaccaaaaacagttgcctggtcgaagaagaaagagaagaaggaaataaag
aaaaaacggcaagagacgaagaagagcaagaagaagaagatgacagacagtggacagaag
agtaagcttgaagcagcagagaagtcaagactagaagaaataaaagaccttcaggatgat
tatcggttattaaagaaacaaaagaaaggcaaaatttctgaagaagactttgagaaacag
tttacagaatcctga
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