Octopus sinensis (East Asian common octopus): 115213527
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Entry
115213527 CDS
T07665
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115213527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115213527
03036 Chromosome and associated proteins [BR:
osn03036
]
115213527
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115213527
Chromosome and associated proteins [BR:
osn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115213527
PBAF complex
115213527
GBAF(ncBAF) complex
115213527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
115213527
NCBI-ProteinID:
XP_029638407
UniProt:
A0A6P7SIZ5
LinkDB
All DBs
Position
LG6:complement(35063112..35103661)
Genome browser
AA seq
1435 aa
AA seq
DB search
MSHMYVDTYGRLEKLVPSSTVRCREEKMALQRKKDGGPNVKFFESVETIAMFDSVRTWLH
KNCKKSIQADPPTNKNLSNLVIQLLQFQEDAFGKQEVNPALTKLPMKCFLDFKPGGSLCH
IFAAVYKYKSDQGWRRFDFQSPSRVDRNVEMFMQIEKSLVQNKCLILPIIYIRPEVDKCL
IPKLKDIIKRHQGAISDNPEDATHIVHPLSGHTGLDDEWFRPVMKRDRHCIVHWWFYPDS
YDTWVTEVNIEQDPEAPYCPSGPWEINARWLLDLEEFNEWMNEEDYLNEDEMEGSNTRKS
RRRNIVKLTVDDINPSMDSERRDKRGDKKGKRKRSPSPVIEKRRKKSNRGQAVTSGKKKP
SREDETDDLTKDMDDPTPEPNIQEVSISKQTTTSRNSKDSELQPIKGGTYIDLDEEQGDK
VNYEREDSKGSCTTSPAPDEAAKKEKKEESEDNVTEQTHQIIIPSYAAWFDYNSIHAIER
RALPEFFNGKNKSKSPEIFMAYRNFMIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAF
LEQWGLINYQVDADNRPTPMGPPPTSHFHILADTPSGLQPVNPAKTVQPSAAQQIVNFND
KNKEKDADDKKDISSFGLRTDLYAKKALKDKGAATRTREWTDQELLLLLEAMEMYKDDWN
KVAEHVGSRTQDECILQFLRLPIEDPYLEEDFGNMGPLAYQPIPFSQTGNPVMSTVAFLA
SVVDTRVASAAAKAALTEFNKLKDEVPPALTNAHMKVVEEAIKEGKNVDANFGLDRSGIA
GTTKEETDAAEAEAQADALKQTEESAVKDDHKKERGTTEESMETDANEKKSDKKDDEESG
QQRGGPTSGSGTTLAADSAEKIDSSVAKQQQSCPNAGDGDDKNTNNGLTGDVHSKNDVAA
KVATTFDPKEKGNVITAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLR
HFEELEAIMDREREALEYQRQQLLQERQQFHMDQIRAAEYRARQIAAQQHMNEQRQQNQG
ATAAGDQGNQGSGSSSNQNTSSASQNPALAAAVGPNYPLHGSPMPPQGPQVHQHVPHGSP
APPNPTSQTPTPQPTQPTPPQSTPAALPSSSASVTPSAGQQATLVPNTSFSHTTNFNPAS
ANNNSNNNSSSNSNSSTSSNSQSHTFPPQTSGNSQGQSQPGQFSQSASAAGPGAGPTPMI
PQQSGQPAGGAPPVSTPHQYPQGPMPPGQSPYISHSGPQGQGPFPQQGPPNASQSHPLMP
QQGSANTGNQPPHPYPPQQASHTQPYTHTGHSHPHYSPQPAGNTGGYPPSTQASQPHYPQ
QGPPQQGGQYPPYHHQGPAQQSQHFHQGHPPQQYPQGSYSQQNYPGAPPGQNTHPYTHGS
GSPYSTQGHGMPPQGTPIPPTGRQMATSGTPGAATATDVADSMVVQSPATPSPKP
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatatgtatgtagatacgtatgggcggctggaaaaactagtgccatcttcaaca
gtccgctgtagagaagagaagatggcgctccagcggaagaaagacggtgggcctaatgtg
aagttttttgagtctgttgaaactattgctatgtttgattctgttcgaacatggttacac
aagaactgtaagaagtctattcaagcagatcctccaacaaataagaatctctccaatttg
gtcatacagctgctgcagttccaagaagatgcatttggtaaacaagaagttaatccagct
ctcactaaacttcctatgaaatgtttccttgactttaaaccaggtgggtctctgtgtcat
atctttgctgctgtttacaaatataaaagtgaccaaggatggagacgcttcgactttcag
tcaccatctcgcgttgacagaaatgttgaaatgtttatgcaaattgagaaatcacttgta
cagaataagtgcctgattttacccatcatatatatccgacctgaggttgataaatgcctt
atacctaaattgaaagacattatcaaaaggcaccaaggagctataagtgataaccctgaa
gatgccacccacattgtacatccattatctggccatacaggtttggatgatgagtggttc
cggcctgtaatgaagagagatcgccattgtatagttcactggtggttttaccctgatagc
tatgatacctgggtgactgaagtcaacattgaacaagaccccgaagctccctattgtcca
agcggtccctgggaaattaatgcacgctggcttcttgatcttgaagaattcaatgagtgg
atgaatgaagaagattatctgaatgaagatgagatggagggcagcaatactaggaagtca
agacgtcgcaacattgtaaaactcactgtggatgatattaatcctagcatggactctgag
cgtagggacaaaaggggtgacaaaaagggcaagaggaaacgttctccttccccggtcatt
gaaaagagacgtaaaaagagcaatcgtggacaagcagtgacctctggtaaaaagaaacct
tctcgcgaagatgaaactgatgatttaacaaaggatatggatgatccaacccctgagccc
aatatccaagaagtttccatatcaaagcagactaccacatctagaaactccaaagatagt
gagctgcaaccaattaaaggtggtacttacattgatcttgatgaagagcagggagataaa
gtgaattatgaacgagaagatagtaaaggctcatgtaccacatcaccagcacctgatgaa
gctgcaaagaaagaaaagaaagaagaatctgaagataatgttacagagcagacacatcag
atcatcattcctagctatgctgcttggtttgattataacagtattcatgccatagaaaga
cgtgctcttccagagttctttaacggcaaaaacaaatctaagagtccagaaatttttatg
gcctatcgtaattttatgatcgatacttatcgactgaaccctcaggaatatcttaccagt
actgcatgtcgacgtaacttggccggagatgtgtgtgcaattatgagagttcatgctttc
cttgagcaatggggccttatcaattatcaagttgatgctgataatagaccgacacccatg
ggacctcctccaacttctcatttccatatacttgctgatactccatcaggactgcagcca
gtcaatcctgccaaaacagttcagccgtctgctgctcagcaaattgtgaacttcaatgat
aaaaataaagaaaaagatgctgatgacaagaaggatatatccagctttggattgagaact
gacctgtatgcaaagaaagcattgaaggataaaggtgcagctaccagaactcgagaatgg
actgatcaagaattacttcttttactggaagctatggaaatgtataaagatgactggaac
aaagtagcagaacatgtaggcagtcgcacgcaggatgaatgtattctgcagtttctcaga
ttgcctattgaagacccttatttagaagaagactttggtaacatgggacctttggcatat
cagccaattccattttcacagactggcaacccagttatgtcaactgttgcattcctagcc
tctgttgttgatacaagagttgcttcagcggcagcaaaagcagctctaactgaattcaac
aaattgaaagatgaagtaccaccagctctcactaatgctcatatgaaagtagttgaagaa
gccatcaaagaaggcaagaatgttgatgccaattttgggttagacagaagtggtattgca
ggcacaactaaagaagagacagatgctgctgaagcagaggcacaagctgatgctctgaag
caaacagaagaatctgctgtgaaggatgaccataaaaaagagagaggaacgactgaagaa
tctatggaaactgatgctaatgaaaaaaaatctgacaaaaaagatgatgaagaatctggt
caacaaagaggtggtcctacatctggaagtggtacaacattggctgcagattctgctgag
aagatcgacagtagtgttgcaaaacagcaacagtcatgcccaaatgctggtgacggggat
gataaaaataccaacaatgggcttactggtgatgttcacagcaagaatgatgttgctgct
aaagtagctacgacctttgaccctaaagaaaagggcaatgttataacagctgccgctgca
gcacttgcagctgctgcagtaaaagcaaagcatctggctggagtagaggagcgtaaaatc
aaaagcctggttgctttgttagttgaaactcaaatgaagaaattagagatcaagttaaga
cattttgaggaacttgaagcaatcatggatcgagaaagagaagcattggaatatcaacgt
caacagttactccaagaacgtcaacagtttcatatggaccaaataagagctgctgaatat
cgtgcccgacaaattgctgcacagcaacatatgaatgaacaacggcagcaaaatcaagga
gctacagcagcaggggaccaaggtaaccaagggtctggatcttcttcaaaccagaacaca
tcgtcagcttcccaaaaccctgcattagctgctgcagttggtcctaattatccactgcat
ggttccccaatgccaccacaaggtcctcaagtccatcagcatgtacctcatggatcacct
gctccacctaatccaaccagtcaaacaccaactccacaacctacacagccaacaccacct
cagtcaacaccagccgctttaccttcgtcttctgccagtgtcaccccatctgctggtcag
caagccactttggtacctaatactagcttcagccatacaaccaatttcaatcctgcgtcg
gccaacaataacagcaacaacaacagcagcagtaatagtaacagtagtaccagtagtaac
tcacagtctcatacatttcctccacaaacatcagggaattctcaaggacagtcacagcct
ggtcagttctctcagagtgccagtgcggctggcccaggggctggaccaacacctatgatt
cctcagcaaagtggtcaaccagctggaggggcaccacctgtctctacacctcaccagtat
cctcagggaccaatgcctccaggtcagtctccatatatttctcatagtggtccacaaggc
cagggtccatttcctcaacaaggacctcctaatgcttctcagagccatccattaatgcca
caacaaggatcagcaaatacaggcaaccaaccaccccatccatatcctccacaacaggct
agtcatactcaaccgtatacccataccggtcatagccatcctcactattctccacagcct
gcaggtaatacaggtggttatccaccatcaacacaagcttcacagccacactatcctcaa
cagggtcctccacaacaaggaggtcagtatcctccataccatcaccagggacctgcacaa
cagagtcaacacttccaccaaggccatcctccacaacaatatccacaaggctcttattcg
caacaaaattaccctggagcgccacctggacaaaacacacatccttacactcatggatct
ggaagcccatactccactcaaggtcatggtatgcctccacaaggaacaccaataccacca
actggacgacaaatggctacatcaggtaccccaggcgctgctactgcaacagatgttgct
gatagtatggtggtccaatctcctgctacaccttcacctaaaccatag
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integrated database retrieval system
