Octopus sinensis (East Asian common octopus): 115215588
Help
Entry
115215588 CDS
T07665
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn04382
Cornified envelope formation
osn04512
ECM-receptor interaction
osn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115215588
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115215588
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115215588
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osn04147
]
115215588
00536 Glycosaminoglycan binding proteins [BR:
osn00536
]
115215588
Exosome [BR:
osn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115215588
Glycosaminoglycan binding proteins [BR:
osn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115215588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115215588
NCBI-ProteinID:
XP_029640661
UniProt:
A0A6P7SRV1
LinkDB
All DBs
Position
LG9:complement(96871739..96958351)
Genome browser
AA seq
1150 aa
AA seq
DB search
MIKILFIALLGLLSVSAQDEIAISKDDDEYEDISSFDAKVRISTERTSTGKHRVFETIDF
GSGEFFDGSIAAELRSSEDTCSTPCRCRAGPIGRPGRRGQHGYNGTDGLRGPHGAEGRPG
EPGPRGLPGPRGPVGKRGLAGVPGATGATGEVGEAGPRGPQGIPGVIGSDGPIGDKGEPG
LKGDRGPLGYQGLPGLLGEPGRHGRDGLPGEDGEPGPQGPIGDPGCKGERGFDGKEGPPG
PPGELFVNGTDFAVLKGQKGERGSPIDLETVKGLKGDKGPIGAPGKRGKKGERGKHGSKG
DKGEIGPPGVLRMGPKGEPGLEGPAGEKAEKGEKGMKGGVGEGSPGEPGVPGKPGTVGLK
GETGMKGEIGLPGPPGSVITSNGTVQAVKGEKGEIGECTGGPINITSIPPGPPGVPGLAG
LKGERGQKGEAGSPLLSGNRTIKGEKGEPGVIYAGNDTAVIPGPPGMKGMKGDVGPVGDP
GLRGPSGLPGRSGHKGEPGVDGINGLDGRDGIDGQDGKQGPEGLKGEPGVPGERCETCGD
LGSGEFLGGKGEPGEKGKPGPQGLSGKPGIGIKGEPGLRGAKGEIGAEGLPGMKGERGER
GLKGDAVKGLPGEKGSIGEQGPLGIDGRPGSEGPEGPPGLKGEPGFGKRGPAGKDGDKGG
KGSKGERGRDGIPASGFNDTFIPSPGEKGDQGEPGQKGAEGEPGAPGEKGSKGDLGPFGK
KGEKGDIGRNGTTGRKGETGERGDIGYPGEEGKPGPEGERGIPGLRGEPGQQGLKGDIGP
VGPRGVPGNDGPKGIPGDTGPMGALGLDGLPGKAGRNGIDGQKGDAGDKGSMGQKGEPGS
YSGSGDFPLGGVPGEPGPPGAKGERGELGKIGPQGEKGMGGPPGENGIPGKPGEKGMIGP
EGVPGERGPIGFRGPTGPLGPSAYIYVRHSQSHSTPNCLHNHTKVWNGYSLLHTEDEGRI
HVQDLGMGGSCLEKFSPIPFLFCTISGTCNFATRTATSYWLSTGRSVPMMPVLGEEVLEH
ISRCAACQSPTPLIAVHSQSVMVPECPKGWNELWTGFSFVMHTIGAVGGGQPLGSPGSCL
ESFYFNPYIECNNRGECYYFHDKHSYWLAGIDKQSSPNGPLNPQSQTLKSGEHIQRISRC
KVCVYDENPQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgattaagatcttatttattgcccttctgggcttattatcagtctcagctcaagacgaa
atagcaatttccaaagatgacgatgagtatgaagacattagctcattcgatgccaaagtc
cgcatcagcacagaaagaacatcgactggtaaacatagagtatttgaaacaatcgatttc
ggttctggagaattttttgatgggtctattgcagcggaattgagatcttctgaagacact
tgttcaactccttgccgctgtcgagctggacctataggacgtccaggtaggaggggacaa
cacggatataatggcacggacggcttaagaggaccccatggtgctgaaggaaggccagga
gagcctggcccacgtggcttaccaggaccccgaggaccagtaggcaagcgtggattagcc
ggagttcctggagctactggagccactggagaagtgggtgaagctggacctagaggtcct
caaggtattcctggcgttatcgggtcagatggtccaattggagacaaaggagaacctggt
ctaaaaggagaccgaggaccattgggatatcaaggacttcctggtcttcttggagaacct
ggacgacatggccgcgacggactaccaggagaagatggtgaacctggacctcaaggacct
attggagaccccggatgcaaaggagagaggggatttgacggcaaagagggcccccctgga
ccaccgggtgaattgtttgtcaatggaacagattttgcggttctgaagggtcaaaaggga
gagcgcggttctccgatagatctcgaaacagtaaaaggattgaagggtgataaggggccc
ataggcgcaccaggtaaaagaggaaagaaaggtgaaagaggaaaacatggaagtaaaggt
gacaaaggtgaaataggtccaccaggtgttctaagaatgggcccaaagggtgaacccggt
ttagaaggtcctgcaggagaaaaggctgaaaagggcgagaaaggaatgaagggaggagtt
ggagaaggatctcctggagaaccaggtgtacctggaaagcctggtaccgtaggattaaaa
ggagaaactggaatgaaaggagaaattgggcttccagggcctcctgggagcgtaatcacc
tccaacggcactgttcaggctgttaaaggagagaaaggagaaattggagaatgcactggg
ggaccgataaacattacctccatccctcctggacctccaggtgttccaggtcttgccggc
ctgaaaggtgaacgtggacaaaaaggtgaagccggatcccctctattgtccggaaaccgt
actataaagggcgagaaaggagaaccaggagtcatttacgctggtaatgacactgcagtt
attccaggcccgccaggaatgaaaggtatgaaaggtgatgttggaccggttggtgaccct
ggcttgagaggaccaagcggcttgccgggcagatcaggacataaaggtgaacctggcgtt
gatggaataaatggtttggacggtagagatggtattgatggtcaagatggtaaacaagga
cccgagggattgaaaggagaaccaggtgtacctggggagaggtgcgaaacatgtggtgat
ttaggttctggtgagtttctaggaggaaaaggagaaccaggtgaaaagggaaaaccaggt
ccacaaggcttgtcaggtaaaccaggaatcggaattaaaggggagcccggtctacgtggt
gcaaaaggtgaaatcggagcggaagggctaccaggtatgaaaggagaaagaggtgaacgt
ggattgaagggagatgctgtcaaaggtctaccgggagagaagggatccattggtgagcaa
gggccacttggcattgatggtagacctggatctgaaggtcctgaaggacctcccggtctc
aaaggggaacccggcttcggaaaaagaggaccagccggtaaagacggcgataaaggtggt
aaaggatcgaaaggtgagcgaggacgagatggaatacctgcatctggttttaatgacact
ttcatcccctcaccaggagaaaaaggcgaccagggagaaccaggacagaaaggagcagag
ggagaaccaggcgcacccggtgagaagggctcaaaaggtgatctgggtccatttggtaaa
aaaggagaaaaaggagatattggaagaaacggtaccactggaaggaaaggagagactgga
gagcgtggtgatattggttatcctggcgaggaggggaaacccggacctgaaggcgaaaga
ggtatacctggacttcgaggtgaacctggtcaacaaggacttaaaggtgatattggacct
gtcggacctcgtggagtaccgggaaatgatggaccaaagggtattcctggtgacactgga
cctatgggagccctaggactggatggtcttcctggaaaagctggaagaaatggaatagat
ggccagaaaggagatgctggtgacaaaggttcaatgggacaaaaaggagaaccaggtagt
tattctggcagtggagattttccactaggaggcgtgccaggtgaacctggacccccaggt
gctaaaggagagaggggcgagttaggaaaaattggaccacaaggtgagaaaggaatgggc
ggtccacccggagagaatggaataccaggaaaaccaggagagaaaggtatgatcggaccg
gaaggagtgcctggtgagagaggaccaatcggctttcgtgggcccacagggccacttgga
ccctcggcgtatatatatgtacgccacagtcagtcccattcaacaccaaactgtctccac
aatcacacaaaagtctggaacggctacagtttgttgcacacagaagatgaaggaagaatc
cacgtacaagatttaggtatgggcggttcctgtttggagaagttcagcccaattcctttc
ttgttctgtaccatttccggaacatgcaattttgctacaagaacagccacaagttactgg
ttatcgacgggtagaagtgttcccatgatgcctgtcttaggagaggaagttttagaacac
atcagcagatgcgcagcttgtcagtcaccaacacctctcattgctgtacacagccagtca
gtaatggtaccagaatgtcctaagggatggaacgaactctggacaggattcagtttcgtc
atgcacacaatcggtgccgtaggaggtggtcaaccattaggcagccctggtagttgtctg
gagtcattctatttcaacccttacattgaatgtaataaccgaggcgagtgctactacttc
cacgacaaacactcttattggttagcaggtattgacaagcaaagcagtccaaatggtcct
cttaacccacagagtcaaacactgaagtcaggtgaacatattcagcgaatcagtcggtgc
aaggtatgtgtgtatgatgagaacccgcaataa
DBGET
integrated database retrieval system
