Octopus sinensis (East Asian common octopus): 115215593
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Entry
115215593 CDS
T07665
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115215593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115215593
Spliceosome [BR:
osn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115215593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_like
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SPT8
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
115215593
NCBI-ProteinID:
XP_029640681
UniProt:
A0A6P7SRX0
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Position
LG1:complement(59214672..59240660)
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AA seq
512 aa
AA seq
DB search
MSDDENEVSYYKKDKGLHYGSLEEHQNTDNDSHRKTSSAIEAGIAAGNINISDGAVFEID
DEQSESQAELLAEFERRKRARQIQVSTDDTEVKATLRQLGEPICLFGEGPADRRERLRQL
LAQIGEDTIKKKKIEQEEKKKKREEENITWYHEGSDTLKESRYWLALYSIPRAKARIKLQ
KDSKNMPKAQRDAKLHDLHKRIRSVSNECSQIGDNRPLSFCQFSPDSSMLAVASWSGLCK
LWSVPDCSLIRTLRGHNCNVGAIVFHPQATLTMDDASCCLASCGQDGTVKLWNLISDEPV
ADIEGHAPYRVSRLAYHPSGRFLGTCCFDNSWRLWDLEVQEEILHQEGHSKPVYCIAFQK
DGALASTGGLDAFGRVWDLRTGRCVMFLEGHLKSVLDIDFNSDGYHIATGSEDNTARLWD
IRQHKCVYTIPAHTNLVSHVKFQPDHGHYLVTSSYDNTSKIWTHPTWSPMKTLAGHEGKI
MGFDISPDLKYMASSSYDRTFKLWASEMLGSL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaaaatgaagtgtcttattataagaaagataaaggattgcattatggg
agtcttgaagaacatcagaatactgacaatgattcacaccgtaaaacctccagtgctata
gaagctggaatagctgctggaaatattaacatatcagatggagcagtgtttgaaattgat
gatgagcaaagtgaaagccaagcagaattactagcagaatttgaacgcaggaaaagggct
cgacagatccaagtatccactgatgacactgaagtaaaagctactttaaggcagctcggg
gagcctatatgtctctttggagaaggtcctgctgatcgtcgagaacgtttgaggcagttg
ttagctcagattggagaagacactataaaaaaaaagaaaattgaacaagaagaaaaaaag
aagaaaagagaagaggaaaatattacctggtatcatgaaggctcagacacactaaaagaa
tctcgatattggttagcactttattctattccaagagcaaaagcacgcatcaaacttcaa
aaagattctaaaaacatgcccaaagcacaaagagatgctaaattacatgatcttcataaa
agaattcggtctgtgtctaatgaatgcagtcagataggagataaccgccctctttcattc
tgtcagtttagtccagattcatctatgcttgctgtggcatcttggtctggtttatgtaaa
ctttggtctgtccctgactgcagtttgatccgtactctccgaggccataactgtaatgta
ggagcaattgtgttccatcctcaagcaactcttactatggatgatgcatcttgctgtctg
gcttcttgtggacaagatggcacagtaaaactctggaaccttataagtgatgaaccagta
gctgatattgaaggccatgccccataccgagtgtctagactggcttatcacccttctgga
agattccttggaacctgttgttttgacaattcttggcgactctgggatttggaagtacag
gaagaaattcttcatcaagaaggacacagtaaacctgtctattgcattgctttccagaaa
gatggtgctctagcgagtacaggaggacttgatgcctttggaagagtttgggatcttcgg
actggtcgatgtgtaatgtttcttgaaggacatcttaaatctgtgttagatattgatttc
aacagtgatgggtatcacattgcaactggcagtgaagacaacacagctagattatgggat
atccgtcaacacaaatgtgtctacaccattcctgctcacaccaaccttgtttcacatgtg
aaattccaacctgaccatggtcactacctggtaacttcttcatatgacaatacatctaag
atatggacccaccctacatggtcacctatgaaaacacttgctggtcatgaaggcaaaatc
atgggatttgacatctcgccagatctcaaatatatggcttcctcttcctatgatcggaca
tttaagttgtgggcctctgaaatgcttgggagtctttga
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