Octopus sinensis (East Asian common octopus): 115215864
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Entry
115215864 CDS
T07665
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03020
RNA polymerase
osn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115215864
09124 Replication and repair
03420 Nucleotide excision repair
115215864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115215864
03400 DNA repair and recombination proteins [BR:
osn03400
]
115215864
Enzymes [BR:
osn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115215864
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
115215864
DNA repair and recombination proteins [BR:
osn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
115215864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
DUF3137
EutB
Motif
Other DBs
NCBI-GeneID:
115215864
NCBI-ProteinID:
XP_029641069
UniProt:
A0A6P7SS56
LinkDB
All DBs
Position
LG9:91528855..91564413
Genome browser
AA seq
1940 aa
AA seq
DB search
MAYVEDSNAPLRECKRIQFGILSPDEIRRMSVTEGGIKYPETMEAGRPKLGGLMDPRQGT
TDRLSRCQTCAGNMTECPGHFGHVELAKPVYHIGFLVKTIKIIRCVCFFCSKLLMDSQNP
KIKDIVNKSKGYPRKRLAHVYDLCKGKRICEGGDEMDVSKNETEMEQLKKGHGGCGRFQP
KIRRMGLDLIAEWKQVNEDSQEKKITLTAERVLEIFKRISDEECQILGMDPKYSRPDWMI
VTVLPVPPLPMRPAVVMYGSARNQDDLTHKLADIVKANNQLRKNEQNGAAAHIIAEDTKM
LQYHVATLVDNELPGLPRAVQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFSARTVITP
DPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDRMHDLVNRGANQYPGAKYIIRDNGERIDL
RYHPKASDLHLQIGYKVERHMQTNDVVIFNRQPTLHKMSMMCHRVKVLPWSTFRLNLSVT
TPYNADFDGDEMNLHLPQSLETKAEIYNLAAVPRMILTPQANRPVMGIVQDTLAAVRKMT
KRDVFLSRAQMMNLLMYLPRWDGRMPPPAIFKPKPLWTGKQLFSLIIPGRVNCIRSHSTH
PDAEDEGPYKWISPGDTKVLIEDGELLSGILCKKTLGTSAGSLVHIVFLELGYECAGLLY
GDIQTVVNNWLLLEGHSIGIGDTIADPSTYRAIQDTILRAKSEVKEVIQKAHNDELEPSP
GNTLRQTFENQVNRILNDARDKTGSAAQRSLSEYNNFKAMVVAGSKGSKINISQVIACVG
QQNVDGKRIPFGFRHRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVKYDGTVRNQVEQLIQLRYGEDGLDACCVEFQQMPTL
KPSNIAFEKKFKFDASNERNMKKCLTEETMKSLMSDPHSIAELEREWEQLTSDRNILRTI
FDKGDNKVVLPCNLQRLIWNAQKIFRIDKRKPSDLHPMKVVDGVRQLCKKLCIVAGEDRL
SIIANENATLLMKCLIRSTLCAKRVAEEYRLSTEAFEWLLGEIETRFQQAQAQPGEMCGA
LAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINISKKPKTPSLTVYLTGQSAR
DAEKAKDVLHRLEHTTLRKVTGNTAIHYDPDPQNTTIAEDQDWVNVYYEMPDFDVSRISP
WLLRIELDRKRMTDKKLTMEQISEKITAGFGDDLNCIFNDDNAEKLVLRIRIMSSDEGKM
QDEEDIVDKMEDDVLLRCIEANILTDMTLQGIESISKVYMHLPTTDDKKRIHITDDGEFK
AVAEWILETDGTALMKVISEKDVDKCRTTSNDIVEIFSSLGIEAVRKSIEKEMNHVISFD
GSYVNYRHLALLCDVMTAKGHLMAITRHGVNRQETGALARCSFEETVDILMEAASHSEID
PMKGVSENIMVGQLARIGTGSFDLLLDGDKCKFGMEIPSNVGPGMLGTGMGTGMFFGSGG
SPMTGMSPQMTPWLTSATPGYIGSWSPGIGSGMTPGGAGFSPSAASESGCSPGYNAYWSP
LSGSPSSPGSAYIPSPGGALSPSYSPKSPVYVPVSPAMTPHSPSYSPSSTSYSPASPAYS
PSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPASPSYSPSSPNYSA
TSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPSYSPSSPSYSPSSPKYSPTSPSYSPTSPS
YSPTSPSYSPTSPQYSPSSPKYSPTSPAYSPSSPKYTPTSTYSPASPKYSPTSPEYSPTS
PQYSLTSPRYSPTSPTFSPTSPKYSPTSPTSSPKYSPTSPTYSPTSPKYSPTSPTYSPSS
PKPSPASPIYSPTDDDDKET
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggcctacgtagaagactccaatgcacccttaagggaatgtaagaggatccagttcggc
attttaagtccagatgaaatccgacgtatgtcggtcacagaagggggtattaaataccca
gaaacaatggaagcaggtcgtccaaaacttggtggcctcatggaccctcgacaagggacc
actgacagattgtcccgatgccaaacttgtgctggcaacatgactgagtgtcctggacat
tttggccacgttgaattggcaaaacctgtttatcatattggctttttggtgaagaccatt
aaaataatccgatgtgtctgcttcttctgttcaaaactcttgatggactcgcaaaacccc
aaaatcaaagatattgtgaacaagtcaaaaggttacccacgtaaacgtcttgctcacgtg
tatgatctctgcaaaggaaagcgtatttgtgaaggtggagatgaaatggatgttagcaag
aatgaaactgaaatggaacaattaaaaaaaggtcatggtggatgtggtcgtttccagcct
aaaatacgtcggatgggtttggatttgatagcagagtggaagcaagtgaatgaagattca
caggagaagaaaattaccctaacagctgaacgagttttggaaatatttaaaagaatatcg
gatgaagaatgccaaattctgggaatggatcccaaatattctcgcccagattggatgata
gttactgtattacctgtgcctccccttcccatgaggccagctgttgttatgtatggttct
gccagaaatcaggatgacttaacacacaaattggcagatattgtcaaagcaaacaaccag
cttcgtaaaaacgaacaaaatggagctgctgctcacattattgcagaagacactaaaatg
ttgcagtatcatgtggcaacattagtggataatgaactgccaggcttacctcgggctgta
caaaaatctggccgcccattaaaatccataaaacaacgcttgaaaggaaaagagggccgc
gttcgtggcaacttgatggggaaacgtgtagacttttcagctcgtactgttatcacacct
gaccccaatctacggattgatcaagttggagtccctcgaagtattgcacaaaatttaact
ttcccagaaattgtcacaccattcaatattgacagaatgcatgatttggtcaatcgaggt
gccaatcaataccctggtgctaaatatattatcagagacaatggtgaaagaattgatcta
cgataccatcctaaagcttcagatctccatttacaaattggttacaaggttgagagacac
atgcagaccaatgacgttgtcatctttaatcgacaaccaacacttcacaaaatgagtatg
atgtgtcacagagtcaaagttctaccttggtctacatttagattaaatttaagtgtaaca
accccttacaatgctgattttgatggtgatgaaatgaatcttcacttgcctcaatctttg
gagacaaaagcagaaatttacaacctggctgctgtacctcgtatgattctcactcctcaa
gccaaccggcctgtcatgggtattgtacaggacacacttgcagctgtcaggaaaatgaca
aaacgggatgtctttttaagcagagctcagatgatgaacttactcatgtaccttccacga
tgggatggacgcatgcctcctcctgctattttcaaacccaaaccactgtggactgggaaa
cagctcttttctctgatcatcccaggacgtgtcaattgtatccgttcacacagcactcac
cctgatgctgaagacgagggaccttacaaatggatatctccaggagacacaaaagttctt
attgaagatggtgaactgctgtctggtattttgtgcaaaaagactcttggtacatccgct
ggttctttggttcatattgtcttcttggagttagggtatgaatgtgccggcctcctgtat
ggtgatattcaaactgttgtgaataactggcttcttctagaaggacatagcattggtatt
ggagataccattgctgatccatcaacatatcgtgccatccaggacaccattctcagggct
aagagtgaagtgaaggaagtaattcagaaagcccacaatgatgaattggaaccaagtcct
ggtaataccttgagacagacttttgaaaatcaggtgaatcgtattttaaatgatgccaga
gacaagacaggtagtgctgctcagcgctcattgtcagaatacaacaacttcaaagctatg
gttgtagctggttcgaaaggatcaaaaattaatatttcacaggttattgcttgtgtaggc
caacagaacgttgatggtaaaaggattccttttggattccgacatagaactttaccccac
ttcatcaaagatgattacggcccagaatcaaggggttttgtagagaactcctatctggct
ggcttgactccttcagaatttttctttcatgccatgggaggtcgtgaaggtctgattgat
acagctgtgaaaacagctgagactgggtatattcagagacgtctgataaaagctatggaa
agtgtaatggtaaaatatgatggaacagtccgaaaccaagtagagcaacttattcagtta
cgttatggtgaagatggtttggatgcatgctgtgtagaatttcagcagatgcctactttg
aaaccctccaatattgcctttgagaagaaattcaaatttgatgcttccaatgagcgtaat
atgaagaaatgtttgactgaagaaacaatgaagagtctgatgagtgatccacattctatt
gctgaacttgaacgagagtgggaacaacttacttctgacagaaatatcttgcgaaccatt
tttgacaaaggagacaacaaagttgttcttccttgtaatttacaaagactgatttggaat
gcacagaaaatctttcggattgataaaagaaagccatctgatcttcatccgatgaaagtt
gttgacggtgttcgtcagttgtgcaagaaactgtgtattgtggcaggtgaggaccgattg
agtataattgctaatgagaatgcaacccttttgatgaaatgcttaatccgatcaacattg
tgtgccaaacgggtggctgaagaatacaggctttctacagaagcttttgaatggctcttg
ggtgaaattgaaacccgctttcaacaggctcaggcccaacctggtgaaatgtgtggtgca
ttagctgcccagtctttgggagaacctgccactcagatgacattgaacactttccattat
gctggtgtgtcggccaaaaacgtaaccctaggtgtgcctaggttaaaagaaatcattaac
atctcaaagaaacccaaaaccccttctcttacagtctatctcactggtcagtcagcaaga
gatgctgaaaaagctaaggatgtcttacatcgtctggaacacacgacattgcggaaggtt
acagggaatactgccatacattatgatcctgatcctcaaaatacaaccattgctgaggat
caagactgggtcaatgtctactatgaaatgccggactttgatgtgtcacgtatttctccc
tggttacttcgcattgaactggaccggaaaagaatgactgataaaaaattgacaatggaa
cagatttcagagaaaatcactgcaggatttggagatgacttgaattgtatttttaatgat
gacaatgctgaaaagttagtccttcgaatccgaatcatgagctcagatgaaggtaaaatg
caagatgaagaagatattgttgataaaatggaagatgatgttctgttgcgctgtattgaa
gccaatattctaacagacatgactctgcaaggcattgagtcaatttccaaggtgtacatg
catttaccaacaactgatgacaaaaaacgtatccatattactgacgatggtgaatttaaa
gcagttgccgaatggattcttgaaactgatgggactgctctgatgaaagtaatcagtgaa
aaagatgttgacaagtgtcgaactacatctaacgatatagttgaaatcttctcgtcactt
ggaattgaagctgttcgaaaatcaattgaaaaagagatgaaccatgtaatttcttttgat
ggttcatatgtaaattaccgacatttggccttgttatgtgatgttatgacagctaaaggt
catttaatggctatcactcgtcatggtgttaacagacaagaaactggtgcattagctcgg
tgttcttttgaagaaaccgttgatattttgatggaagcagcttctcattcagaaattgat
ccaatgaaaggtgtctcggagaacataatggtggggcaacttgcacggattggcaccggt
agttttgatttacttcttgatggggacaagtgcaaatttggtatggagataccatccaat
gttggccctggcatgcttggtactggtatgggcactggaatgttctttggatctggtgga
agccctatgactggaatgtcaccacagatgacaccatggctcacaagtgccacacctggt
tatatcggctcttggtcccctggtattggaagtggaatgacacctggtggtgctggcttt
tcaccatcagctgcaagtgaaagtggttgcagtcccggctacaatgcatactggtctccc
ctcagtggatctccgtcatctccaggcagtgcttacattccgagccctggtggcgcactg
tctccaagttattcacctaaatctcctgtttatgtacccgtgtcaccagctatgacacca
cacagcccaagctattctccatcaagtacatcatattcccctgcaagtcctgcttattct
ccatcttcaccaagctatagcccaacatcaccatcttactcacctaccagtccttcttat
agcccaacttcaccctcttattctccaaccagcccctcctactccccaactagcccatca
tactcccctaccagtcctagttatagtcctacttccccctcatattctccaacaagtcct
agttacagccccacatctccttcttactctccaaccagcccaagctatagccccacttct
ccttcttactctccaaccagtccttcttattccccaacaagtccatcttattctccgact
agccctagttacagtccagcaagccccagttactcgccttcctctcctaattacagtgct
accagcccttcatattctccaaccagcccatcttactctcctactagtccttcatactct
cccaccagccccaactatagtcctagctctcctagctacagtcctagcagtccaagttac
tcccccagcagtccaaaatacagccctacatccccttcttactctcctacatcaccatct
tactctccaacttctccttcttactctcctacttctcctcagtattctccttcttctcca
aaatattctcctacaagccctgcatactctcccagcagtccaaaatacacacccacatca
acttattctcctgcttcaccaaaatacagccctacttctcctgagtacagcccaacgtcc
cctcagtatagtttaacttctcctagatattctccaaccagtcctactttcagcccaact
agccccaaatattctccgaccagtccaacatcaagtcccaaatactctcctaccagccct
acatacagccccacaagtcctaaatattctccaactagtcccacatattctcctagttca
cccaaaccttccccagccagtccgatttacagcccaactgatgacgatgataaagagaca
taa
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