KEGG   Octopus sinensis (East Asian common octopus): 115218472
Entry
115218472         CDS       T07665                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
osn  Octopus sinensis (East Asian common octopus)
Pathway
osn03020  RNA polymerase
osn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:osn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115218472
  09124 Replication and repair
   03420 Nucleotide excision repair
    115218472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:osn03021]
    115218472
   03019 Messenger RNA biogenesis [BR:osn03019]
    115218472
   03400 DNA repair and recombination proteins [BR:osn03400]
    115218472
Transcription machinery [BR:osn03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115218472
Messenger RNA biogenesis [BR:osn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     115218472
DNA repair and recombination proteins [BR:osn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115218472
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 115218472
NCBI-ProteinID: XP_029644170
UniProt: A0A6P7T179
LinkDB
Position
LG1:complement(203617127..203624582)
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVRKKLFTEVEGTCTGKYGFVIAVTSIDNIGAGLIQ
PSRGFVVYPVKYKAIVFRPFKGEVFDAVVTQVNKVGLFTDIGPLSCFISRHSIPADMEFD
PNSNPHCYKTKDEDVVIQQEDEIRIKIVGTRVDAKDIFAIGTLMDDFLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccatgtgtcattagaacatgaaattctacttcatcctcgatattttggcccc
aatctactaaacattgtacgaaagaaattatttacagaagtggaaggaacctgtacgggg
aaatatggatttgttattgctgtcacatcgatcgataacattggtgccggactgattcaa
ccgagcagaggttttgttgtttatcctgttaaatacaaagcgatcgtcttcagaccattc
aaaggagaggtgtttgatgcagttgtaacccaagtaaataaagttggcttatttactgat
attggacctttgtcatgttttatctcccgacattctattcctgctgatatggaattcgat
cctaattcaaatccgcactgctataaaaccaaagacgaagatgttgttatccaacaggaa
gatgaaatacgtatcaaaattgttggtacaagagtagatgcaaaagatatttttgctatt
ggaacacttatggacgatttccttggtttagttagttaa

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