Octopus sinensis (East Asian common octopus): 115219176
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Entry
115219176 CDS
T07665
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115219176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115219176
Enzymes [BR:
osn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115219176
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115219176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box
Motif
Other DBs
NCBI-GeneID:
115219176
NCBI-ProteinID:
XP_029645144
UniProt:
A0A6P7T346
LinkDB
All DBs
Position
LG14:27676046..27754384
Genome browser
AA seq
1720 aa
AA seq
DB search
MDYPEWDIPDSKTINSISFEIFSSEEIKRLSVKPITSSQTFDALLHPQPNGLHDLALGSL
NKYICFTCGQPPSTCTGHLGHIPLPLLLYNPMLYRTMYKILDLACLSCNLLVLSKETLQI
IESKISLIKSGHLIAYHEINGRTNDPNKIEEILNSLPKTEVAKDEEARQIRHLRHVWKQC
VALLPKITRRKCPHCLATRPTLKQFQNCQIFTSMMVSETKTKMPRMKEKQGGGKSHSSIL
DLTFKKSYLTPVEVKERMHKIWEHNGYILRMVYDFLDVDVEYPTDIFFLEVVPVIPSCFR
PCVVLKGNKYESVQTSSYKRIVVECEKIQQILHELRKMEGGQTEGEGEGKGEGVGEVDLN
TVNDAKHKNLKKRLNETWLALQKDVNWLYDDSSDPSSFRIRGVRQILEKKEGLFRKHMMG
KRVNYVARSVITPDPNIEVAEIGVPEIFAKTLTYPQPVTPWNVDKLRKMVINGPNEYPGA
AYVVDQHGVKQRLLAENPTQRQSVANQLLTPSSVNKSLVTCKKVYRHLVNGDYLLLNRQP
SLHKPSIQAHRARVLPNIKTFRLHYANCKAYNADFDGDEMTAHVPQTELGRAEAKEISSA
QNQYVVPKDGSPLAGLIQDHVVAGVRLTIRGRFFRREEFNQLLFAALVNKPDAIRLLPPA
IIRPEKLWSGKQLISTLLINIIPKNKPLITMESTSKIPERLWKSIDHFDASISRALSQEM
GESHVIIRDSELLCGVLDKSQYGSTAYGLVHCCYELYGGEVAANLLTCFGRLFTSFLQRD
GFSLGIKDILMTKQADQERKKFIDYIKSYDIDRSREELQVVVGESTKSVSEIVFGNNPML
VAELDKKVKKITNEVQNNLLRAIMPSGLLVKFPDNNLQLMVNAGAKGSSVNAMQMSCLLG
QIELEGRRPPMMPSGRFLPSFLQYDISPKAGGFITGRFTTGISPQEYFVHCMAGREGLID
TTVKTSHSGYLQRCLVKHLESLIVNYDLTVRDSDGSVIQFYYGEDSLDVTKTQFINENHF
PMLIKNRASILNQKMPLKEADSNFNCRQIQNKIYKSRQESGSVPKYSADRSAFLRFCKKK
QEDLEVPDNISCMTGRSLKSTYLCSLWHNMSEKRRQKYQKKVISCPDPVLSKTWPYTQQG
AISEEIYKMAKNFCSKSENSHRICPPGQAETKETLTEENFEKLINYKYLQCMVDPGEAVG
LISSQSIGEPSTQMTLNTFHFAGLGEMNVTLGIPRLREILFGSKNMKIPTMDIPVLDTNF
ARAEAKKLQMKLNPVTLSQVLEKVDVTDRIEMSSGFNDRLYIVRLQFLPQCKYQDQLATN
PDDILRHVELKYITGLLKSIKSTIKFTQASLRILPKDIVHTIKVTLTDSAEPSANKEQDG
ESVGEEEEEPAANAERGDESEDSTSSGEDEMDAVDGKQKKQTSDEHDYNDDDDDDDDDDD
DDDDDDDDNDDDEDSDSETETKKESNTTEIMEDEDEEFKNEEVVEEYFYLEDDMKKTKRE
PAKGKYLESFNEAILSYSYDEEKSLWCEVVFKFNLRLTKVDLMTIIKNNAETSIIHRVPG
IKRSILTSVKNELHLQTEGIHISYIQQFPNILDINRIYCNSPTIMAQVYGIEAGLKVIIK
EIQSVFGVYGIKVNYRHLSLIADYMAFEGQLTFFNQKGMQACPSPLQLITFESAYRGIAN
AASQHLKDYLNSPTSQLVTGKLPSFGTGHFDILLPLIPVK
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggattatccagaatgggatattcctgattctaagactatcaacagcatatcttttgaa
atattctcatctgaagaaattaaaagactcagtgtgaagcctataaccagctcacagaca
tttgatgccctccttcatcctcagccaaatggcttacatgatcttgcactcggttccctt
aacaagtacatctgttttacctgtggtcaaccacctagcacctgcacgggacatcttgga
catattcctttacctctcttgctctacaatcctatgctctaccggacaatgtacaagatt
ctagacttggcatgcctcagttgcaatctgctggttttgagcaaggagaccctgcaaata
attgagagtaaaatttccctaattaaaagtggtcatttgattgcataccatgagattaat
ggaaggaccaatgatccaaataaaattgaagaaatattgaattcgttaccaaagacagaa
gtggcaaaagatgaggaagcaagacagattcgccacctgaggcatgtatggaaacaatgt
gtggctttgctaccgaaaataactcgaagaaagtgtccccattgcttggcaacaagacca
acactgaaacagtttcaaaactgccaaatctttacatcaatgatggtatcagaaacaaag
acgaagatgcccagaatgaaagagaaacaaggtggagggaagtcacattcaagtatactt
gatttaacattcaagaaatcgtacctaacccctgttgaagtcaaggaacgtatgcataaa
atctgggaacataacggctacattctaaggatggtctatgactttttagacgttgatgtt
gaatatccaactgacatcttttttcttgaagttgttcctgtgattccatcttgttttaga
ccatgtgttgttttaaaaggtaacaagtatgaaagcgtgcagacttcttcctacaaacga
atcgtggtggaatgtgagaagatccaacaaattctccatgagctcagaaagatggaaggt
ggccaaacagaaggtgaaggtgaaggcaaaggtgaaggtgtgggtgaagtggatctaaat
acggtcaatgatgcaaagcataagaacctaaagaaaaggctcaacgagacttggttggct
ctacagaaggatgtcaattggttgtatgacgattcctctgacccaagttcattccgcatc
agaggtgttagacagattctcgagaaaaaagagggtctcttccggaagcacatgatgggg
aaacgtgttaactatgttgcccgatcagtaattacccctgaccccaatattgaagtcgct
gagattggagttcctgagatctttgctaaaacattgacctatccacaacctgtgacccct
tggaatgtggataaactgaggaaaatggtgattaatgggccaaatgagtatccaggagcg
gcgtatgttgtcgaccagcatggtgtgaagcagcgtcttcttgctgaaaatcccacccag
cgtcagtcagtagccaaccaactcctcactccatcatctgtcaacaagtctttggtcaca
tgtaagaaggtttatcgccatctcgtgaatggcgactaccttctcctcaatcgacagcca
tctcttcacaagcccagtatacaagctcatcgagctcgtgttttgcccaacatcaagact
ttccggttgcattatgccaactgcaaggcttacaacgcagattttgatggggatgaaatg
acagctcacgtacctcaaactgaactaggtcgggctgaagctaaggaaatttctagtgcg
caaaaccagtacgtggtccctaaagatggaagtcctctggcaggtctcatccaagatcat
gttgttgctggagtgcgccttaccattcgtggtcgtttcttccgaagagaagagttcaat
caattgctgttcgcagcacttgttaacaaacctgatgccatccgactgttaccacctgct
attattcgacctgagaaactctggtctggaaaacagcttatatctactttactaatcaat
ataatcccaaagaacaagcctttaattacaatggaaagcacatcaaagattccagaaagg
ctttggaagtcaatagaccattttgatgcttcaataagtagagctctttcacaagaaatg
ggggagagccatgttataatccgagacagtgaattgctgtgtggtgtcctggataaaagc
cagtacggatcaacagcatatggattagtacactgttgttatgagctctatggcggagaa
gtagctgcaaacctcctcacatgctttggccgacttttcacttccttcttacaaagagat
ggattttcattgggaattaaagatattctcatgacaaaacaggctgatcaggaacgcaag
aaatttattgattacatcaaaagctacgatattgatagatcaagagaagaactgcaagta
gtggttggtgaaagcaccaagtctgtttctgaaattgtctttggaaacaatccgatgctt
gttgcagaattggacaagaaggtgaagaaaataaccaacgaggtgcagaacaacttattg
cgagccattatgccatctggtctgcttgtcaaattccctgacaataatcttcagttgatg
gtcaacgccggtgcaaaaggatcttcggtgaacgctatgcaaatgtcctgtcttctgggc
cagattgaattggaaggacgaagaccaccaatgatgccaagtggacgtttcttgccatca
tttctacagtatgacatttctcccaaggctggtggcttcattactggccgtttcacaaca
ggaatttcacctcaggaatactttgtccattgtatggccggcagagagggtctcattgac
accactgtaaaaaccagtcattcgggataccttcaacgttgcttagttaagcatttagag
agcctcatcgttaattatgacctcacagtcagagacagtgacggcagtgttattcagttt
tattatggtgaagacagcctggatgtaaccaagactcagtttattaatgagaatcacttc
ccaatgttgatcaagaaccgtgcttccatcttaaaccaaaagatgcctcttaaagaagct
gacagcaacttcaactgtcgtcagatacaaaacaaaatttataaatccaggcaagagtct
ggctccgtcccaaagtattcggctgacagaagtgcattcttgagattctgcaagaaaaaa
caggaagaccttgaagtgccagacaacatttcttgtatgactggacgttctttgaaaagc
acctacctgtgcagtctgtggcacaacatgagtgagaaacggcgccaaaagtatcagaag
aaggttatatcttgtccagatcctgttttgtctaagacttggccatatactcagcaaggt
gccatctctgaagaaatatacaaaatggcaaagaatttctgttccaagtctgaaaattca
cacaggatatgcccaccaggacaagctgagactaaagagactcttacggaagaaaacttt
gagaaactgataaattacaaatatctacaatgtatggtggaccctggagaagctgttggc
ttaatttcatctcagtcaattggtgagccatcaactcagatgacactgaacacattccac
tttgctggtcttggagagatgaacgtcactctgggtattcctcgtctccgtgagattctc
ttcggttccaaaaatatgaagattcctacaatggacattcctgtcttagacacaaacttt
gccagggctgaagccaaaaagctgcagatgaagttaaaccctgttacactcagccaggtg
ttagaaaaggtagatgttacagatcggattgagatgtcatctggatttaacgatcggttg
tacatagtccgtttacagttcctacctcaatgcaaataccaagaccagttggcaacaaat
ccagacgatatccttcgccacgtggaattgaaatacatcactggtttgctgaaatccatc
aaatcaacaatcaagttcacacaggcctcgttacggattcttcccaaggacattgttcat
actataaaagttacgctgactgattcggctgaaccatctgctaacaaggagcaagatgga
gaaagtgttggggaggaggaagaggagcctgctgccaatgccgagaggggagacgagtct
gaagactccacatccagtggagaagacgagatggatgcagttgatggcaaacagaagaag
cagacaagtgatgaacatgactacaatgatgatgatgacgatgatgatgacgacgacgac
gatgatgatgacgatgatgatgacaatgatgatgatgaggacagtgacagtgagacggaa
acaaagaaggagagtaatacgaccgaaattatggaagatgaggacgaagagttcaagaac
gaagaggttgtggaagaatatttttaccttgaagatgacatgaagaaaacaaaaagagaa
ccagcaaaaggaaaatacctagagtcattcaatgaggctatattgtcatatagttacgac
gaagaaaagagtctttggtgtgaagtagtattcaagtttaatttaagattaactaaggtt
gatctgatgaccatcatcaaaaacaatgctgagacatccattatacatagagtgcctgga
atcaaacgttccatcttaacaagcgtcaaaaatgaactccatctgcagacggaaggaatt
cacatcagctacattcagcagtttcctaatattcttgacatcaatcgcatctactgcaac
agtccaacaatcatggcacaggtctatgggatagaagctgggctaaaggtcatcatcaag
gaaatccaatctgtctttggagtttatggcatcaaagtgaattaccgacatttgtctctc
atcgcagactatatggcatttgaaggtcaattgacctttttcaatcaaaaaggcatgcaa
gcgtgtccgtccccattacaattgatcacttttgagtcagcttaccgcggcatagcaaat
gctgcatctcaacatttgaaagactatttaaattctcctacctctcagttagttacaggt
aaactaccctcgttcggcactggacactttgacatacttttacccctgatacctgttaaa
taa
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integrated database retrieval system
