Octopus sinensis (East Asian common octopus): 115219845
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Entry
115219845 CDS
T07665
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13191
RNA-binding protein 16
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115219845
03041 Spliceosome [BR:
osn03041
]
115219845
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115219845
Spliceosome [BR:
osn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115219845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115219845
NCBI-ProteinID:
XP_029645990
UniProt:
A0A6P7T6F6
LinkDB
All DBs
Position
LG15:34976090..35055171
Genome browser
AA seq
1612 aa
AA seq
DB search
MEAVRAFNNELSGLYEAKPPVSRAKMAQLTKCAIKAIKFYKHVVQSVEKFIQKCKSEYKV
PGLYVIDSIVRQSRHQFGAEKDVFAPRFTKNVVLTFQNLFKCPPDEKSKVVRVLNLWQKN
AVFPVEVIQPLLDLAGEPTNPELIASAQRAVDGLVAVSQKSGNATNQFSGEHHSHEAAGQ
VRHEKELPSASSLLEAQNDMLDTVKQLLQQTQKQPTSLSAQQQQLQQLQLLQQQLLQQTE
LMQQPAQQQQAAAIIDSNLLSQIQTLTNQLLNNQIKTLHSKPPEPGFNKKLLDFDYGESD
DEEDKHEDNSDGIPGNVQNILNDPTIMQQIHQMSQTIKKTEQLKNELNMQEQIRQQLLKQ
QEKEFNQQISQEPPPQIQHHIPVAPQMPPQPPPPSQIIQNQPPPMHPQMPYYVSEPPYPA
PPNQNDLSERMELDNRHDRHYGDVPNAEVIVIDDQPDIHKTSRNRDRSRSRSPRRKKRSR
SRSRERRRRSRSRDRDRDRDRSDRERDRDRRKRSRSRERERERQREKERERRRKGLPSIK
ERHLSVCTRTIWLGHIAKVTSEDELRLEIEKYGAVESINMIPPRGCAFVCMARRKDAPKA
VEKLKGVKIHSNQLKVAWAPGIGVKDAEYKDMWDAELGVTYIPWEKLPQDLTHLMEGGMI
DEDTIPEHLKAGLQLEKTEPTGTNNIEEPQQNFKMNEVNITNPPIAVPPPTAIPPQQPQL
QGQPMPRMLMQIPPPTGMMPPMMMPIAPGMPRPPTTGVPPPPLGMAPASTASAVLAPRPV
PPVPTAAGVSISLPTMAPTVVLTTVASNNPAMPSLPPPGLVQLPQSLQNNLSSSILATGG
ISVPPRPPPPNFAAQLRQQPRPFPPQPFPGGPTFRLQVPAPAPEGARAIANVRPPLDTNA
TLTAQESKENISESSQQDDWLKRSTEPAGDDAESETKHEGITTQTIEPTSEVLQTPTGTM
PAISATLQQMLAQRPPPNPGVGMRPPLPPGMAPRPGINGPPTELRLGGPSGPLLTGPPNR
ATAIGIPGMPAGIAIGPRAISVDGPPPGFPAGRMGLPGGPRFTPRFPPVFPGGPPPRFQG
PMGTMLRPPRPDADGRFPANTFTNNGTFDRAGFERAIRPFGPIGPRPDRPANDRWMGRDR
WAPRETGPGMRFRRDFDQRDEFFDRSRYVLDNRDPDRNAGGRRMSRFDGEEDHEGERPPH
HYEDDRSLHEDEHARHGDDRDRSRRDDERDRLRHVDERDRLRRPDERERTRHDDDRNRLR
YEVRDRFRFGDNGREGPEGIRPRNREDRPRKSRWSDVDDKAVETPSMEAPSLETIKAFDT
IPENANALPDTDNAEESVAMEISDAPGDVTPTCEELEDAVNSSQPENYTANEEFPATPVA
DFVPSEEFSLTEKYHPAEETPDDQPPLSGSPPEEAPVDSFIPTDSSPPAVDFTPMESDAP
VENFDAPTPENFPLQHGDDDDDDNNNDDNNNNYFNDDDDVVDSNNNNSNNNNNDDDNINN
INDDDDDDIDISNNMALPSENETPSFAESSPPPALEEEFSSTENFIPPQTEEFTPMKNCS
PEEPMNEADEFPSVEDEVSEMTKAEEPEYPTGEESPLQSEEQTTACDENDEE
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtgagggcgttcaacaatgagttatctggtctttatgaagccaagccgccc
gtgtctagggcaaaaatggcccagctgactaaatgtgccattaaagccatcaagttttat
aaacatgttgttcaaagtgttgagaaattcattcaaaagtgtaaatccgaatacaaagtt
ccaggattatatgtgattgactccattgtgcggcagtcccgacaccagtttggtgctgag
aaagatgtatttgcaccaagatttaccaaaaatgtagtgctgacatttcaaaatctcttc
aaatgtcctcctgatgaaaagagcaaagttgttcgtgtattgaatttgtggcagaaaaat
gctgttttccctgttgaggtcattcagcccttgttggatctagctggggaacctaccaat
ccagagttaatagcttcagctcagcgagcagttgatggccttgtggctgtaagtcaaaag
tctggaaatgctaccaaccagttttctggagaacaccattcacatgaagctgctggacag
gttcggcatgagaaggagttaccatcagcaagctctcttctggaagcgcagaatgacatg
ctagacaccgtgaagcaattacttcagcaaacacaaaagcagccaacaagtctgagcgct
cagcaacaacagcttcaacaactgcaactactccagcagcagttactacagcagaccgag
ctgatgcagcagccggcccaacagcagcaggcagcagcaattattgatagtaaccttttg
tcacagatccagactttgacaaatcagttgctcaacaatcaaatcaagacattacactct
aaacctcctgagcctggattcaataagaagttgctggactttgattatggggaaagtgat
gatgaggaagacaagcatgaagataactctgatggcatccctgggaatgtccagaatatt
ttgaatgatccaacaattatgcagcagatccaccaaatgtctcaaaccatcaagaagacg
gaacaactaaagaatgaactcaacatgcaggaacagatacggcagcaacttctgaagcag
caggagaaagagtttaatcaacagataagtcaagagccacctccacaaattcaacatcat
atccctgtggcaccgcagatgccacctcagccacccccgccgtcgcaaataatccaaaac
caaccccctccaatgcatccacaaatgccttactatgtttctgaacctccatatccagca
ccaccaaatcagaatgatctctcagagcgtatggaattggacaaccgacatgaccgtcac
tatggcgatgtgcctaatgccgaggtgatagttattgatgatcagcctgatatccataaa
acctctcgcaacagggatcgatcaaggtccagatcacctcgacgcaagaagagatctagg
tcaagatctcgggagaggcggagacgatctcgttctcgagatcgtgaccgagacagggat
cgaagtgacagagaaagagacagagatcggcgcaagcgttcaagatcacgggaaagagaa
agggagcgccagcgagaaaaagaacgggaacgcagaagaaaggggcttccatccattaaa
gagagacaccttagtgtgtgtacaagaactatatggctgggtcatatagccaaagttact
tctgaagatgaactgcgattagaaatagaaaagtatggtgctgtggaaagcataaatatg
attcctccccgaggatgtgcttttgtatgtatggcaaggagaaaagatgctcctaaagct
gtggaaaaattgaagggagtgaaaatacattctaaccagttaaaagttgcttgggctcct
gggataggtgtaaaggatgcagaatacaaagatatgtgggatgctgaattgggtgtaact
tacattccttgggaaaaattgccacaagatttgactcacctaatggaaggtggcatgata
gatgaagacactattcctgaacacctcaaagctggtttgcaacttgagaaaacagaacca
actggaacaaacaacatagaagaacctcaacagaattttaagatgaatgaagtgaatata
acaaaccctccaatagcagtccctcctccaacagcaatacctccacaacagcctcaactg
caaggacaacctatgccaagaatgctaatgcaaatcccacctccaactggcatgatgcct
ccgatgatgatgccaattgctccgggaatgcctcgcccaccaaccacaggtgtacctcca
cctccattaggaatggcaccagcatcgacagcctcagcagttcttgctcctcgaccagtg
cctccggttccaactgctgctggagtgtctatatctttgccaacgatggctccaactgtt
gtattgactacagtggcatcaaacaatcctgccatgccttcattaccgccaccaggttta
gtgcagcttccacagtctcttcagaataatttaagcagttccattcttgctacaggcggc
atatcagttcctcctagaccacccccacctaatttcgcagcgcaacttcgacaacagcct
aggccattcccacctcagccatttcctggaggtccaacgtttcgcttgcaagttccagca
cctgctccggagggtgctagggctattgctaatgttagacctccccttgacacaaatgct
actctgactgctcaagaatccaaagaaaacattagtgaatctagtcagcaggatgattgg
ctgaagcgaagcacagaaccagccggtgatgatgcagagtctgaaacgaaacatgaaggt
atcaccactcaaactattgaaccaacttctgaagtgttacaaacacccacaggaacaatg
ccagctatatctgcaacattacaacagatgcttgcccagcgtccacctccaaatccagga
gtagggatgcgtccccctctaccacctggaatggcaccacgtcccggtatcaatggcccg
cctactgaacttcgtctcggtggaccaagcggacctcttttaacaggtccacctaaccga
gccactgctatcggtataccaggtatgcctgctggtattgccattggtcctcgggccata
agtgtagatggccctccgccaggctttccagctggccggatgggcttgcctggaggacca
cgatttactccccggtttcctcctgtatttccagggggcccacctcccagattccagggt
cctatgggaactatgctacgaccaccacgtccagatgcagatggcaggtttcctgccaac
acatttactaataatggtacgtttgacagagctggttttgaacgtgccatacgtccattt
ggtcctattggtcctagacctgaccggccagctaatgataggtggatggggagagataga
tgggcacccagagaaactggtcctgggatgcggttccgaagggattttgaccagagggat
gagttctttgaccgatctcgctatgttcttgataatagagatcctgatcgcaatgcagga
gggagacgaatgtccaggtttgatggggaggaagatcacgaaggtgagcgtcctcctcac
cattacgaggacgatcgctctctacatgaagacgaacatgctcgtcatggcgatgacaga
gatcgctcaagacgagacgacgagagggatcggttgcgacacgtggatgaacgtgaccga
ctcaggcgtcccgatgagagggagcgaacccggcatgatgacgatagaaataggttacgt
tacgaagttagagatcgatttaggtttggtgataatggaagagaaggtccagaaggaatt
agacctagaaaccgtgaagatcgtcccagaaagtcccgctggagcgatgttgatgataag
gctgtggagactccttcgatggaagctccttcgttagaaactattaaggcatttgacaca
attcctgaaaatgctaatgcattgccagacactgataatgctgaggagtcggttgccatg
gagatttctgatgctcctggtgatgttactccaacctgtgaggaattagaagatgctgta
aacagcagccaaccagagaattatacggcaaatgaggagtttccagccactcccgttgca
gacttcgttccttcagaggaattttctctcacagaaaaataccatccggctgaagaaaca
cctgacgaccagccgccattgtctggctcaccccctgaagaagccccggttgacagtttc
atccccactgatagctctccccctgcagtggattttactccaatggagtctgatgcacct
gtggaaaattttgatgctccaacccctgagaattttcctctgcagcacggggatgatgat
gatgatgataataacaatgatgataacaacaacaattactttaatgatgatgatgatgtt
gttgatagcaacaacaacaacagcaacaacaacaataatgatgatgataatattaataac
atcaatgatgatgatgatgatgatattgatattagtaataacatggctttgccgtctgaa
aatgaaactcctagcttcgctgaaagctctcctcctcctgccctagaggaggaattctct
tcaacagaaaattttatccctcctcaaacagaggaatttacccctatgaaaaactgctct
ccagaggagcctatgaacgaggcagatgagttcccttcagtggaggatgaggtttcagaa
atgacaaaggcagaggaacctgagtatccaaccggtgaggaatcaccattacagagtgaa
gaacagacaacagcttgtgatgaaaatgatgaagaataa
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integrated database retrieval system
