Octopus sinensis (East Asian common octopus): 115220482
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Entry
115220482 CDS
T07665
Name
(RefSeq) 3'-5' RNA helicase YTHDC2-like isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115220482
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115220482
Spliceosome [BR:
osn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115220482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
Ank_2
nSTAND3
AAA_19
Ank
Ank_5
T2SSE
Ank_4
Sigma54_activat
AAA_22
AAA_16
ATPase
ANK_LRRK2
NACHT
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
115220482
NCBI-ProteinID:
XP_036365709
UniProt:
A0A7E6FD83
LinkDB
All DBs
Position
LG16:complement(1657917..1747623)
Genome browser
AA seq
1743 aa
AA seq
DB search
MASGGYQSRSRAFTPVYDVISPQTGANFRNGSSHNNTSPHYYKGVKNGLPSGIGRNSNHG
PRPGQAICIGEEVKIAVHMAIDNFRSNECQKELEFPSSLNASERAYIHRLAESLGLKSKS
RGKNSNRFLTVTKKNNNVTQRQVATFNLEKNSRQHIRTLMQRYPLTNKERQDLFPKPEKS
LGDGRDIMKTSVGRLSNGVPQVPPKSGESTVSGLRETLPIYQHSDEILQALDSHQVVLVT
GETGSGKTTQVPQIILNDHHNKGKLCRIFCAQPRRIAALSIAERVSAERGEKIGQIVGYQ
IRLESKVSPRTLLIFCTTGVLLRTLMGSDAALNTVTHIIVDEIHERDRYSDFLLITLRDV
LPRFKNLKLVLMSAALNTELFINYFSNCAFVSIPGTLFEVKEYFLEDVLKWTNYSTKAME
RSKRELSNVEKQQKQLSDWCSRKLSLTNESEDKPYRTKMAGKNLEVLDKALEKSVEEKDE
LEPWLIKEMDQLLTDAWLTDSEEAFEQIFNLIINESISVDYKHSETSATALMIATGRGYF
DVVERLLSLGASVNVQASNDWTVFEWAKKFQRAEILELLESYRNSPEDNVTSDTVLVKSS
ENMTPQDRELLNIYHQCFDDDKIDKDLIICLIHKICTTSSEGAILVFLPGYEDIVGVKEK
ILEEKRFESIRYILFMLHSSMQSLDQKRVFKSSPPGVRKIILSTNIAETSLTINDVVYVI
DSGKMKEKSFDAFCSVTMLKTHWVSKANALQRKGRAGRVQPGVCYHLFSRIRHDNLEQYQ
VPELLRLPLHELCLQTKMIAPSNTSIADFLSNAIQAPSFLIIRNALQLLKQIDALDPWED
LTELGHHLADFPIAPSLGKMVLYSVVLKCLDPVLTIVCSLANKDPFLIPGQPSQRRAANL
VRKKLSANTYSEHMILLRAFQAWQKARTEGWEKTFCEKHFLSSASMEMIIGMRAQLLGQL
RASGFVRARGGGDIRDLNINSEKWCVVKAALCAGLYPNVLRIDRVTGQLLSAKEMKIRLH
NLSVFSPNLSASQRNTDLSSFPSDWIIYEEMSRNSSLAFVRCCTVISPITVALFAGPAKL
SPEVIKEAESGQIDERKCHDFTRPHDLDNVSDSGEEENEEMKKSSLRLDEWLSFQVDSES
SSLVLQLRQKWYSLFIRRMRAPSKPWTQTDEAIVRSIVEVLVTEERELGLQQPAGIGQRP
ISMAAESILSSVGNQSCIDSEDQNDDRSRMAKRSSALSASSKKKDSTKYRCDNKTGNNSN
LSHFNSNLSLSGNINYQGSRPNTPGDTSQPSSPTKRSEKDPGATSSHPCRMFLMKCNNQR
NLDTSFSKSIWTTSPNNEKKLNKAFQDGKTVYLIFSIQGSGCFQGYAKMLSTFSKDRSAE
YSMPGLGATCTVDWLKRGNIPFHNVQHLSNPWNDNKRIQVSRDCQEIEPFVGETLLKQWD
KLGPHYSQKRPITKSSLENSSHHNSNKPLYTQANNLPNTALTLSAGLNGCPEPGAYNLTG
GDIFSNPFQGGPMNAKGLVAGSKQSSNINQFLGPHSFGMSGNANMLKGGGSGGGKGGPSS
SANHHYSNKHGNGNYGNASGSSNSGSSIGNSSHHHNNNNNNNSSNNNNNNNKYLYRGGGG
GNMANSASHPCHSGGHLLGIYQGHRHQNMIGGNAAAAAAAAAAAGLNPMYMTPMMQTQAP
PPNHATSLPSSRHGMSPVVILQRGNTTTASNSSNSNNNNNSASSGQHGSNQSKMDSHSMF
SNS
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggtgggtatcaaagtcgctcgcgagcattcacccctgtttatgatgtgatt
tctccacagactggcgccaatttcagaaatggatcttcacacaacaatacctcaccacat
tattacaagggtgtcaagaacggcctcccttcaggcattggcaggaatagtaaccatgga
ccacgacccggacaggctatctgtattggggaagaagtgaaaattgcagttcatatggca
atcgataacttccgcagtaatgaatgccagaaagagttggagtttccttcttccttgaat
gcttcagagagggcttatatacatcggcttgctgaaagtcttggactgaaatctaaaagt
cgagggaaaaattcaaatcggttccttactgttactaagaagaacaacaatgtcacacaa
cgccaagttgccactttcaacctggaaaagaactcaagacaacacataagaaccctaatg
caaagatatcccctcacaaacaaagaacggcaagatttatttcccaagcctgagaaatcc
ttgggtgatggcagagacatcatgaaaacttcagttggtcgcctcagtaacggcgtgcca
caggttcctcctaaaagtggagaatctacagtgtcaggacttcgcgagacgttacccatc
taccaacattctgatgaaattctacaagcactggacagccaccaggttgtgttagtaacg
ggtgaaactggttctggaaaaaccacccaggtgccacaaataattctgaatgaccaccac
aataaagggaagctgtgtagaatattctgtgcccaaccacgcagaattgctgccttatct
attgccgagagagtttctgctgagcgaggggaaaagattggccagattgtcggctatcag
atacgtcttgaaagcaaggtgtcgccacgaactttgttgattttctgcaccactggagta
ttgctgaggacacttatgggaagtgatgctgctttgaacactgttacacacatcattgtc
gatgaaattcacgaaagagacagatacagtgacttcctgcttataaccttacgagatgta
cttccacgtttcaagaatctgaagttggttttaatgagtgcagcattaaatactgaactg
tttattaattatttcagcaactgtgctttcgtaagcattccaggaacattatttgaggtg
aaagaatattttttagaagatgtattgaaatggaccaactattccacaaaagcaatggag
agatctaaaagagaattatcaaatgtggagaaacaacagaagcaattaagtgactggtgt
agcagaaaattaagcctgactaacgaatctgaagacaagccttaccgaactaaaatggct
ggtaaaaacttggaagtattagataaagcccttgagaagtctgtagaggagaaagacgaa
cttgaaccctggttgattaaagaaatggatcagcttctcacagatgcttggctcactgac
agtgaagaagcttttgagcagatcttcaatttaattattaacgagagcatcagtgttgac
tacaagcattctgaaaccagtgcaacagcgttaatgatagccactggtcgaggctacttc
gatgtagtcgagaggctgttgagtctgggagcaagtgtcaatgtccaggcatccaacgat
tggactgtctttgaatgggctaagaaattccaaagagctgagattctggagcttctggaa
agttatcggaattctccagaggacaatgtcacatcggacacagttctagtgaagtcttct
gaaaatatgacaccccaggacagagaacttttgaacatctaccaccagtgttttgatgat
gacaaaattgacaaagatctcatcatatgtcttatccataagatatgtactacttcttct
gaaggtgctattcttgtttttcttcctggctatgaagatattgttggtgtgaaagaaaaa
attttggaagagaaaagatttgagagtatcagatatattctttttatgttacactcctct
atgcagtcactggatcagaaacgagtttttaaatcatctccaccaggagtgaggaaaatt
attctctcaacaaacattgctgaaacaagtctcaccattaacgatgttgtctatgtaatt
gactcagggaaaatgaaagagaaatcctttgatgcattttgttctgtgaccatgttaaaa
actcattgggtttccaaagcaaatgctttgcagagaaagggccgtgccggacgagttcaa
ccaggtgtttgttatcacttgttcagcagaatacgtcacgacaacctggaacaataccaa
gtcccggaactgttacggttacccctacacgaactgtgtttgcaaaccaaaatgattgca
ccttcaaacacatccattgctgactttctctccaatgctatccaagcacccagtttcctt
atcatccgcaatgctctccagctgttgaagcaaatcgatgccttagatccttgggaagat
ctaactgaattgggccatcatttggcagacttccccattgctccgtctcttggtaaaatg
gtactttattctgtggtcttgaaatgtctggatccagtgttgaccattgtttgttccctt
gccaacaaagatccttttttaattcctggtcaaccatctcaaagaagagctgccaattta
gttaggaagaaactatctgccaacacatacagtgagcatatgattctactcagagccttt
caggcttggcaaaaagctcgaaccgaaggctgggagaagaccttttgtgagaaacacttt
ctgtcttcagcatcaatggaaatgataattggaatgagggcccaacttcttggacaattg
cgtgcttcagggtttgtgagagcacgaggcggaggtgacataagagacttgaatataaat
tccgagaaatggtgtgttgtgaaagctgccctctgtgcaggtttatatccaaatgtactt
aggattgatcgtgttacaggacagttattatcagcaaaagagatgaaaattcgattgcac
aatttgtccgtgttcagtcctaatctgtcggcgagccagcgtaacactgacctctcttca
ttcccttcggactggattatctacgaggagatgtcacgtaacagtagtttggcctttgta
cgctgttgtacagtcatctcacccatcaccgtcgccttatttgcagggcctgccaagttg
tccccagaggtcattaaagaagcagaaagtggacagattgatgagagaaaatgccatgat
ttcaccaggccccatgatcttgataatgtcagtgacagtggagaggaggagaatgaggaa
atgaagaaatcttcgcttcgtctcgatgaatggttatctttccaagttgattctgagagt
tcttccttagttcttcagttgagacagaagtggtacagtttgtttatcagacgaatgcga
gctccgtcaaaaccttggactcaaactgatgaggctatcgtgcgatctattgttgaagtg
ttggtaacagaagagagagaacttggcttgcaacagcctgcaggtattggacaaagaccc
atttcaatggctgcggaatcaattctctctagtgttggtaaccaaagttgtattgattct
gaagaccagaatgacgaccggtcgcggatggctaaacgaagttcagcactaagtgcatct
tccaaaaagaaagattccacaaaataccgttgtgataacaaaacaggcaacaacagcaac
ctgtcccacttcaacagtaacctgagtttgagtggcaacatcaactatcaaggtagtcga
cctaacaccccaggtgacacgtcacagccttcatcccctaccaagcgatcggaaaaagac
cccggggccacgtcttcacatccttgtcggatgtttcttatgaagtgcaacaaccagcgc
aacttggacacctcattcagcaagtccatctggactacgtccccgaataacgagaagaaa
ctcaacaaggctttccaggatggcaaaacggtctacttgatattctcaatccaaggaagt
ggctgtttccaaggttatgctaaaatgttatctacatttagcaaagatcgaagtgcagag
tattctatgccaggcctaggtgctacctgcacggttgattggttgaaaaggggaaacatt
cccttccacaatgtccagcatctttcaaacccttggaacgacaacaagaggatacaagtg
agccgtgattgtcaggaaatcgagccatttgttggtgagactctactaaaacagtgggat
aaattaggtcctcactacagccagaagcggccgataacgaagagcagtttagagaacagc
agccaccacaatagcaacaaaccactgtatacgcaggcaaacaacttgccaaacactgct
ctgacactctctgctggcctcaatggttgccctgaacctggagcttacaatctcactggt
ggagacatcttctcaaaccctttccaaggcgggccgatgaacgcgaagggcctggttgca
ggctcgaaacagagcagcaacatcaaccagttcctcggcccgcacagctttggcatgtct
ggtaatgcaaacatgctgaaaggtggcggtagtggtggtggcaaaggtggtccttcttct
tctgctaatcatcactatagcaacaaacatggaaatggtaactatggcaacgccagtggt
agcagcaacagtggcagcagcatcggcaacagcagccaccatcacaacaataacaacaac
aacaacagcagcaacaacaacaacaacaacaataaatatctgtatcgaggcggaggcgga
ggcaacatggcaaactctgcatctcacccgtgccactccggtggccacctcctcggcatc
taccagggccaccgccatcagaacatgattggcggcaacgcagcagcagcagcggcggcg
gccgcagcagcaggcctgaaccccatgtacatgactcccatgatgcagacccaagcgcca
ccaccgaaccatgccacaagcttgccttcgtctcggcacggcatgtcccccgtcgtgatc
ctacagcgaggcaacaccaccacagcatccaacagtagcaacagcaacaacaacaacaac
agtgctagcagtggtcaacatggtagcaaccaatccaaaatggacagccattccatgttc
tccaattcttag
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integrated database retrieval system
