Octopus sinensis (East Asian common octopus): 115221997
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Entry
115221997 CDS
T07665
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn04382
Cornified envelope formation
osn04512
ECM-receptor interaction
osn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115221997
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115221997
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115221997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osn04147
]
115221997
00536 Glycosaminoglycan binding proteins [BR:
osn00536
]
115221997
Exosome [BR:
osn04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
115221997
Glycosaminoglycan binding proteins [BR:
osn00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115221997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
115221997
NCBI-ProteinID:
XP_029647964
UniProt:
A0A6P7TAJ4
LinkDB
All DBs
Position
LG19:complement(15842910..16028740)
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AA seq
1618 aa
AA seq
DB search
MRGLPGIPGLLGLEGSKGDMGAPGCNGTRGHDGKPGRPGIAGGPGEIGLPGLNGIKGQPG
ELLFIGRMKGDRGEDGQQGFPGVPGFAGFAGARGPPGIIGPMGVKGRRGVKGSIGPRGED
GKAVTGDPGEPGPDGEPGQYLGQVTKPSEYTGLKGDKGPRGYRGDPGMQGISGQKGLDNY
PGPKGFPGGQGPPGRRGKRGKEGSPGEAGPKGLTGDKGYPGTKGRDGFKGERGERGYRGP
KGFAGGAGRKGEVGTGEVIIVKGVRGPLGPRGYHGPPGKRGPTGNSGEIGFPGMPGVPGL
PGPPGLEGLHGFSFKGERGFPGLPGTDGVPGGPGLRGSVGYVGDKGEVGDSYPGNPGESG
SSGRDGLNGLPGAPGIRGDLGDFGPPGDGFGPKIGIVGQKGVSGDFGERGSPGNPGWPGT
YGGKGERGDDCEFCRSGYPGVKGEVGVPGRSGRPGFDGPDGLPGITGEKGYSGIPGLPGS
PGTKGSRGFPGPLGLQGRKGEKGDYVYVKGSKGAPGDVGIPGAYGQSGKSGDVGFRGRSG
PAGYPGETGVPGRIGIDGLDGLPGSPGLPGLDGLPGESYGGLPGDKGERGLPGFPAFGIA
GQKGEPGDLSFFDVVNGDRGHPGIDGLPGEPGLDGRPGSEGRPGFPGAVGEPGDSGINGI
DGTRGEGGTEGYPGMMGSPGPKGFQGDPGLEGKPGLIGRPGSKGEPGQSYGRGPPGKQGD
DGLPGLPGPRGPSGFAGLPGPKGYPGFPGDEGRPGLPGTPGGSYPGQDGVPGLRGPSGDD
GLSGLPGSPGEDGRQGLPSRIGDIEDRGDPGYPGDDGPPGKTGFPGQPGKDGPRGSDGFS
GTKGDRGFNGRPGVKGLSGIPGRDGIKGERGNDGLPGANGRDGKNGYDGRRGDPGFPGDE
GARGEAGLQYAAEKGDHGFPGADGLPGANGLDGLNGLIGRKGEPGDITRSRKGDPGETGL
PGLPGLQGASGTKGYPGEIGLVGLDGINGEDGLPGPAGLPGRSGAMGKKGSRGRRGGQGR
DGFPGAPGDDGFNGLQGLKGAYGDPGSDGVPGVPGRKGEIGNPGRDGYPASPGNPGYDGE
PGLPGLPGVDGPSGEKGDRGTVGLSGLKGEQGEPGFPGPDGLDGLDGPPGERGDGLSNVQ
APDHGNPGDPGRRGEAGNAGTPGQNGSNGFKGEQGLPGTSLDGYPGVRGDDGLPGLPGDN
GLPGRDGVPGLPGFPGEPGDRGYPGLAGNDGLPGLTGDLGIHGYPGVDGSPGRPGPKGSS
GFPGPEGLNGQPGINGLTGLPGTDGLPGLPGDEGIPGEPGLPPYSEKGAQGDPGFDGPRG
DSGLRGLPGDVGLDGIPGLPGSRGSRGLPGVDGLNGADGHLGNPGISGLTGLPGSQGLPG
DQGPPGPDDGALGILFARHSQSTGVPECPVRSTKLWAGYSLLFLIGNGRSASQDLGQPGS
CLRRFNTMPFMFCNLNNRCTVASRNDYSYWLSTPEPMTRMMTPIEGEDIRSYISRCAVCE
TTSQVLAVHSQTIMIPDCPTGFQTMWIGYSFIMYTSGVIEGSGQPLESPGSCLEDFRNQP
FIECQGGRGSCNYYSTSVSFWMATIDRSAQFSRPLSETLKAGAQRRRVGRCKVCMRVS
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggcttcctggaattccgggtcttttaggactggaaggaagcaaaggagatatg
ggtgcacctggctgcaatggaacaaggggtcatgatggaaaacctggaaggcctggaatt
gctggaggccctggagagattggtttacctggtttaaatggtattaagggccagcctggt
gaactgttatttattggcagaatgaaaggtgacagaggtgaagatggacaacaaggattt
ccaggtgttcctggttttgctggttttgctggagccagaggtccaccaggtataatcggt
cctatgggtgtgaaaggtagaagaggtgtaaagggtagcattggacccagaggtgaagat
ggtaaagcagtaacaggagaccctggtgaaccgggcccagatggagaacctggccagtat
ttgggtcaagtaacaaaaccaagtgaatacactggccttaagggagacaaaggaccacgt
ggataccgcggcgaccctggtatgcaaggaataagtggacaaaagggtctggataattat
cctggtcccaaaggtttcccaggtggtcaaggcccaccaggaagaaggggcaaacgaggt
aaagaaggaagtccaggagaagctggtccaaaaggactcactggagataaaggttatcct
ggtactaaaggacgtgatggctttaagggagaaagaggagaaagaggttaccgtggacct
aaaggctttgctggtggggctggtcgaaaaggtgaagttgggacaggagaagtaatcatt
gtgaaaggagtgcgtggtcctctaggtccccgtggatatcatggtccacctggaaagaga
ggtccaactggaaacagtggtgaaattggtttcccaggtatgcctggagttcctggacta
cctggtcctcctggtcttgaaggattacatggattttcctttaagggcgagcgtggtttc
ccaggtttacctggtactgatggagtccctggtggtcctggactacgaggaagtgttggt
tatgttggagataaaggagaagtaggagatagctatccaggaaatccaggagagtctggt
tcatctggaagagatggattaaatggccttccaggtgcacctggtattcgaggagatctt
ggtgattttggaccacctggtgatggatttggtcccaagataggaatagttggtcaaaaa
ggtgtttctggagattttggagaaaggggttctcctggaaatcctggctggcctggaaca
tatggtggaaaaggtgaacgtggtgatgactgtgaattctgcaggtctggatatcctgga
gttaagggagaagttggtgtacctggaagatccggtcgtcctggttttgatgggcctgat
ggtcttccaggaataacaggagagaagggatattctggtattcctggcttacctggatct
cctggtacgaagggttcaagaggattcccaggcccactaggtttacaaggaagaaaagga
gaaaaaggtgattatgtctatgtaaaaggaagtaaaggtgcacctggtgatgttggaatt
cctggagcttatggccaaagtggaaaatctggagatgttggctttagaggtcgatcaggc
cctgctggatatccaggagaaacgggagtccctggacgtattggaattgatggtctggat
ggtctaccaggttcgcctggtctgcctggtttagatggtcttcctggagagtcttatggt
ggtttgcctggtgataaaggagaacgtggtttgccaggttttcctgcctttggcattgct
ggacaaaaaggtgaaccaggagatttatctttctttgacgttgttaatggagacagaggc
catcctggaattgatggattacctggagaaccaggtcttgatggtcgtccgggctctgag
ggtcggccaggcttccctggtgcagttggtgaacctggagatagtggtatcaatggaatt
gatggcacaagaggtgaagggggaactgaaggctatccaggaatgatgggtagcccagga
ccaaaaggatttcaaggagaccctggactggaagggaaacctggtttgataggtagacct
ggatcaaagggagagcctggacaatcttatggaagaggtccaccaggtaaacaaggtgat
gatggattacctggattacctggccctagaggtccatctggttttgcaggattacctgga
ccaaaaggataccctggatttcctggtgatgaaggtcgaccaggattacctggaacccca
ggtggttcctacccaggtcaggatggtgttccaggattaagaggaccatctggtgatgat
ggtctatctggtttgccaggcagcccaggagaggatggccgacaaggattacctagtaga
attggagatattgaggatcgaggagatcctggatatcctggtgatgatggacctccgggt
aaaactggatttcctggccaaccaggaaaagatggtcctagaggctcagatggattcagt
ggtacaaaaggtgatcgaggatttaatggtagacctggtgtgaaaggtctttctggtata
cctggaagagatggaataaaaggtgaacgtggaaatgatggattaccaggtgctaatgga
cgtgatggtaaaaatggatatgatggtagacgtggagaccctggtttccctggtgatgaa
ggtgccagaggagaagcaggtttacagtatgctgcagaaaaaggagaccatggattccca
ggagctgatggtttacctggagctaatggtctggatggcttgaatggacttataggaagg
aaaggagaaccaggagatataactagaagtaggaaaggtgaccctggtgagactggcctt
cctggtttgcctggtttacaaggagcaagtggtacaaaaggatatccaggagaaattgga
cttgtgggtctggatggtataaatggagaagatggtcttcctggcccagctggattgccc
ggcagaagtggtgccatgggtaaaaaaggcagcagaggaagacgcggaggacaaggaaga
gatggtttccctggagctccaggagatgatggatttaacggactacaaggacttaaaggt
gcttatggtgacccaggttcagatggtgtccctggagttccaggacggaaaggtgaaatt
ggtaatcctggtagggatgggtaccctgcatctcctggtaatcctggatatgatggagag
ccgggtctccctggcctccctggtgtcgatggaccatcaggtgaaaaaggagaccgaggt
actgttggtctaagtggtctgaaaggtgaacaaggagaacctggtttcccaggtcctgat
ggtcttgatggtttggatggaccgcctggtgaaagaggtgatggattgagtaatgttcaa
gctcctgatcatggaaatcctggtgatcccggcaggagaggtgaagcaggtaatgctggt
actccaggtcagaatggatcaaatggcttcaaaggagaacaaggacttccaggtacttct
cttgatggttacccaggtgttcgaggagatgatggtctaccaggattgcccggtgataat
ggtttgccaggtcgtgatggtgttcctggtttacctggatttccaggagaaccaggggac
aggggataccctggattggctggaaatgatggacttccaggactaactggagacttagga
atacatggatacccaggtgttgatggatcacctggacgtccaggaccaaaaggaagctca
ggattccctggtccagagggattgaacggacagccaggaataaatggattgactggtctt
cctggaacagatggattacctggattacccggtgatgaaggtatacctggtgaacctggt
ctcccaccatactctgaaaagggtgctcaaggggatccaggctttgatggaccaagagga
gattctggccttagaggattgccaggtgatgtaggccttgatggcattccaggattgcca
ggaagcagaggttcaagaggacttccaggtgtcgatggattgaatggagctgatggacat
ttaggtaatcctggtatttcaggtttaactggacttccaggtagtcaaggtctccctggt
gatcaaggacctccaggtccagatgatggagcattgggaattttatttgccagacacagc
cagagtactggagtccctgagtgtcctgtaagatcaacaaaactctgggcaggatactct
cttcttttcttaattggcaatggacgttcagcatcacaagatttaggtcagcctggtagc
tgcttaaggagatttaatacaatgcctttcatgttctgtaacttaaacaacagatgcact
gttgcatcccgtaatgactacagttactggctatcaacacctgaacctatgacaaggatg
atgacacccatagaaggtgaagatattcgatcttatattagtagatgtgcagtttgtgaa
acaacatcacaggtcctagcagtgcacagccaaacgatcatgatccctgattgtcctact
ggtttccaaacaatgtggattgggtacagtttcattatgtacacaagtggtgttattgaa
gggtcaggtcaaccacttgaatcacctggttcctgtcttgaagatttccgaaaccaacca
tttattgaatgccagggtggtcgtggctcctgtaattattattcaacatcagtatctttc
tggatggctacaattgaccgttcagctcagttctcacgacctttgagtgaaacactgaag
gctggtgcacaacgtcgacgtgtaggcagatgcaaagtgtgtatgcgagtatcttaa
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integrated database retrieval system
