Octopus sinensis (East Asian common octopus): 115222565
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Entry
115222565 CDS
T07665
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03082
ATP-dependent chromatin remodeling
osn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115222565
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115222565
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osn01009
]
115222565
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115222565
03036 Chromosome and associated proteins [BR:
osn03036
]
115222565
Protein phosphatases and associated proteins [BR:
osn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115222565
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115222565
SWI/SNF complex
115222565
Chromosome and associated proteins [BR:
osn03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115222565
PBAF complex
115222565
SWI/SNF complex
115222565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
115222565
NCBI-ProteinID:
XP_029648699
UniProt:
A0A6P7TCB6
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Position
LG20:15103397..15120929
Genome browser
AA seq
379 aa
AA seq
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MAAHTATKTFGEKPKSFQLDDGGEYYYIGSEVGNYLRLFRGSLYKKYPSMWRRLVTVEER
KKIAAMGFGQHTLATNITLLKAPEVDEIFEGNDDKYKAVSLSSDPFPTRENKSKRNNWVP
ALPSSSHHLDAVPCSTPINRNRLGKNKMRTFPLCFDDTDPSQIHENASTAEVLIPIRLDM
EFDGQKLRDCFTWNKNEALISPEQFAEILCDDLDLNPLNFVPAIAQAIRQQIEAYPLDNL
LEEQADQRVILKLNIHVGNISLVDQFEWDMSEVDNSPEEFAIKLCAELGLGGEFVTAIAY
SIRGQLSWHQRTYAFSRQSVSFSEAPLPTVEVAIRNQNEADQWCPFLETLTDAEMEKKIR
DQDRNTRRMRRLANTAPSW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcacacagcaacaaagactttcggtgagaaacccaaatcattccaacttgat
gatggaggagaatattattatattggctcagaggttgggaactatcttcgactgtttcga
ggttcactttacaagaaatatccttccatgtggcgccggctggttactgtggaagaaagg
aaaaagatagcagcaatgggttttgggcaacatactcttgcaactaacatcactttgttg
aaagctccagaagtagatgaaatttttgaaggaaatgatgacaagtataaagcagtatct
ctttccagtgatccctttcccacgagagaaaacaaatccaagcgaaacaattgggtacct
gctctccctagtagttcacatcatttagatgctgtaccatgttccacacctatcaatcgc
aatcggcttggaaagaataaaatgagaacatttccattatgttttgatgacacagatccc
tcacaaatacacgaaaacgcttctactgctgaagtgttaattccaatccgtttagacatg
gagtttgatggtcaaaagttacgagattgtttcacttggaataaaaacgaagcccttata
tcacctgaacagtttgcagaaatattgtgtgatgatttggaccttaacccactcaacttt
gttccagctattgctcaggcaattcggcaacaaattgaagcttatccgttagataacctt
cttgaagaacaggcagatcaacgagttattttaaagttaaacattcatgttggtaacatc
tccttggtggaccagtttgaatgggacatgtcagaggttgataacagccctgaagaattt
gctataaaactttgtgcagagttgggtctcggtggcgaatttgtgacagctattgcatat
agcattcgaggacaactgagttggcatcaaagaacatatgcatttagccgtcagtctgtg
tctttcagtgaggcacctctgcccacagtggaagtcgctattcgcaaccaaaacgaagct
gatcaatggtgtccgttcctggagacgctcactgatgcagaaatggagaagaaaataagg
gatcaggatcgtaataccaggagaatgcggcgacttgcaaacactgcaccatcctggtga
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