KEGG   Octopus sinensis (East Asian common octopus): 115222662
Entry
115222662         CDS       T07665                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
osn  Octopus sinensis (East Asian common octopus)
Pathway
osn03013  Nucleocytoplasmic transport
osn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:osn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115222662
  09122 Translation
   03013 Nucleocytoplasmic transport
    115222662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osn03019]
    115222662
   03041 Spliceosome [BR:osn03041]
    115222662
Messenger RNA biogenesis [BR:osn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     115222662
Spliceosome [BR:osn03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    115222662
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_ACSF4 Beta-prop_TEP1_C WDR54 Beta-prop_WDR75_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 115222662
NCBI-ProteinID: XP_029648840
UniProt: A0A6P7TEX8
LinkDB
Position
LG20:complement(6063043..6103864)
AA seq 359 aa
MPSSLHKLFPESDMHERDLAARQQMYTTIYSMVFSPCGKYLAAGNNYGYCAIFSLPSSLS
PEATENSWKPLFTFKASDDGPICSMTSTSRELICGCSGYIKAWLWSHIIKRTNKLAWALI
IPTKSFSVSEINPWLLITRILYNGEKNLYAGCGDNLIYIYDLETGSLKSTLSGHKDYIHC
VTLCNTRQECVSAAEDGTVRIWDARSSNEAVCMLEPYKNEMCGRPEFGKWLGCVAMDTGD
DWLVCGGGPKLSLWHMRSLSATTAFDTPKSCQKHALIHQDTILSAGSEPSVFHWSLNGEL
KAKIPCTPTCVFKVDVNTNSKSNKVLCVAGNSSKLDVSTNFRYKAFSLTFHSSENVFTK
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgccttcttctcttcacaaactttttcccgaatcagacatgcatgaacgtgacttagct
gctcgccagcaaatgtacacaactatttattccatggttttctcaccttgtggcaaatac
ttagcagctggcaacaactatggatattgtgctatattcagtttaccaagttccttgtct
cctgaagccactgaaaattcttggaaacctctgtttacatttaaagcctcagatgatggt
ccaatatgttccatgacgtccactagtcgagaattaatatgtgggtgcagtggttacata
aaggcatggctctggagtcatattatcaaacgaacaaataaattggcctgggctttgatt
atacccacaaaaagcttttcggtttctgagattaatccatggttactgataacaaggatc
ctttataatggagagaaaaacctttatgctggatgtggtgacaatcttatctacatttat
gatctagaaactggctcattaaagtcaacattgtcaggacacaaagattatatacattgt
gtgacactgtgtaacactcggcaagaatgtgtgtctgctgctgaagatggcactgtccga
atctgggatgcaagatcttccaatgaagccgtttgcatgttggagccatacaagaatgag
atgtgtggccgtccagaatttggcaagtggttaggatgtgttgccatggatacaggagat
gattggctggtgtgtggtggaggacccaagctctctttgtggcacatgaggtctttgtct
gcaacaactgcatttgatactcccaagagttgccaaaaacatgctttgattcaccaagat
acaattttatcagctggcagtgagcccagtgtgttccattggtcactgaatggggaactg
aaagctaaaattccttgtaccccaacgtgtgtcttcaaagtggatgtgaatactaactcc
aaaagtaacaaggttctgtgtgtggcagggaacagttcaaaactcgatgtgtccaccaac
ttccgttataaagcattctcattgacgtttcattcttctgaaaatgttttcaccaaataa

DBGET integrated database retrieval system