Octopus sinensis (East Asian common octopus): 115223146
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Entry
115223146 CDS
T07665
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115223146
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
115223146
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
zf-C2H2_fungi
Motif
Other DBs
NCBI-GeneID:
115223146
NCBI-ProteinID:
XP_029649429
UniProt:
A0A6P7TE50
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Position
LG22:14551270..14571555
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AA seq
633 aa
AA seq
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MSEQTVPKCPVCDETEFENIDGMYYCLTCCSQIPKVFDTEVENYGQENYLFSSKLKKSQA
DVDKYGCKWSTIEGFQFVIKEQVKALIALGADPRLKEVVFDLWVKYLTKVKVAFHNNTQE
EKPFIIKFPTRSRDVVQTKGGSPVVKHMSQSKETPESSQRFCSHRFTKSTYSNIERMSMA
KTIAFCYVGLLYTNDLTMPSDIVRWIQNGKVPYLHVSSQFPERFKFFAEDTVTFNPPNIP
STKRIRLLCGRLIYFLKLSDIPRIPVLKLVHKCICRLHLPGHFHGLAGNIISQRTQFFRI
NHKSLQSLPPMELFAMAYVIILIKILFRLDGINERKVSSFAAEYAKLVEDDNIFIWENWA
NHLTAVANNLKLQQETHKPCATTIIQDLEHFLDHCKETSFYKTRMSFNSNRKTDLHQSIN
SLFLNITDHWKESVSDLDSGLSKDLSLSSEPFSIPVNHKLKFRQSSITYRTQPKVFLHQN
RYKLSDSTIQSATEYESSDEDTEIPSSQMDLFTTEPVQKKPRLLACKVVANTLKQGRRRS
IDTSNCKYLQRKLESLNIDNSYLPADPATFTEYPDRTYLWLVSVCSYLIEENKLALNNQV
CNLECLLKLQPYSRSRKASLINIYQYFEKARSQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaaacagtaccaaagtgtccggtatgtgatgaaacggagtttgaaaatatc
gatggaatgtattactgtttgacctgctgtagtcaaataccgaaagtctttgatacggaa
gttgagaattatggccaagagaattacctgttttcatctaagcttaagaaatcacaggct
gacgttgacaaatatggttgcaaatggtcaactatcgaaggtttccagtttgtcataaag
gagcaagtgaaggccttgatagcattaggagctgaccccagactaaaggaagtagtcttc
gatttgtgggttaagtacctgaccaaggtcaaagttgcattccataacaatacccaggaa
gagaagcctttcattataaaatttccaacaagatctcgagatgtggtacagaccaaaggt
ggatcaccggttgtgaagcacatgtctcaaagcaaggagacccctgagtcttcacaaagg
ttctgttctcaccggttcaccaaaagtacatacagcaatattgagcggatgtctatggcg
aaaactattgctttctgttacgtgggccttctctataccaacgatctcacaatgccctct
gatattgtcaggtggattcagaatggtaaagttccttacttacacgtgtcttctcagttt
cctgaaagattcaagttttttgcagaagacactgtcacttttaaccctcctaatattcca
agcacaaaaagaattcgtttgttgtgtggtcggctgatttactttttgaaacttagtgat
attccaaggataccagttttgaaattagtccacaaatgcatttgtcggttacatttgcca
ggacattttcatggtttggctgggaatataatctctcaaaggacacaatttttccggatt
aatcacaaatctttgcaatctttacctccaatggaactctttgcaatggcttatgtgatt
atccttataaaaatcttatttcgtctcgatggaatcaacgaaaggaaagtgtccagtttt
gctgcagaatatgccaaactagtagaagatgataatatattcatttgggaaaactgggcg
aatcacctgactgcagttgcaaacaatttaaaactgcaacaagaaacccacaaaccatgt
gctacgactatcatccaagatttagaacactttttggatcactgcaaagaaacatctttt
tataaaacccggatgtctttcaactcaaacaggaaaacggatctgcaccagtctataaat
agtcttttcctcaatattactgaccactggaaagagtcggtctctgatctggattctggc
ctttcaaaagatctttctctttcctcagagcctttcagcattcctgttaatcacaaacta
aaatttcggcaaagctccatcacttacagaacgcaacccaaagtctttcttcaccaaaac
cgttacaaattatcagactctaccattcagtcagcaacagaatacgaaagcagcgatgag
gatactgagattccgtccagtcagatggatctttttaccacggaacctgtccagaagaaa
cctcgactccttgcctgcaaagttgtggcaaacactctgaagcaaggcaggagaagatca
atcgatacaagcaattgcaaatacttacaaaggaaattggagtcactcaacatcgacaac
tcatacttaccagctgaccctgcaacgtttacagaatacccagatcggacgtacctatgg
ctggtttcagtttgtagttatctcattgaagagaataagcttgctctcaacaaccaagtc
tgcaaccttgagtgccttcttaaattgcaaccctattcgagatccagaaaggcttcattg
ataaatatttatcagtatttcgagaaggccagaagccagtga
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