Octopus sinensis (East Asian common octopus): 115223309
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Entry
115223309 CDS
T07665
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115223309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115223309
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115223309
mRNA degradation factors
5'-3' decay
Lsm complex
115223309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SPT2_N
DUF5401
Motif
Other DBs
NCBI-GeneID:
115223309
NCBI-ProteinID:
XP_029649679
UniProt:
A0A6P7TEQ6
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Position
LG22:complement(8127156..8150475)
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AA seq
180 aa
AA seq
DB search
MLVLKDVSRWRCVRGPGTDSVVAEKRTAEAEETAAATSSAFLYLEMSYLPGTASLVEEID
KKLLVVLRDGRTLIGFLRSVDQFANLALHRTIERIHVGKKYGDIPRGIFIIRGENVVLLG
EIDVENENSQDLEQVSIDEILEMQREQQLRQLEEEERKKKALLERGVHPHTDSIQDDYFF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgctagttctgaaagatgtcagtaggtggcggtgcgttcgcgggccgggcaccgactca
gttgttgcggagaagaggacggcggaggctgaagaaacagccgcggcgacatcatcggct
tttctctatttagagatgtcttatctgcccggaactgctagtttggtcgaagaaatagac
aaaaagctgcttgtcgttctccgagatggtcgtacattaataggtttcttacgaagcgtt
gaccagtttgccaaccttgctctacatcgaacaattgaacggatccatgttggtaagaag
tatggtgatattcctcgtggaatcttcattatccgtggagaaaatgttgttttattagga
gagatagatgtggagaatgaaaacagccaagatctggagcaggtctccattgatgaaata
cttgagatgcaaagggaacagcaactgagacaattggaagaggaagaaagaaagaagaaa
gctcttttggaacgtggagttcatcctcatacagattctatccaagatgattatttcttt
taa
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