Octopus sinensis (East Asian common octopus): 115223380
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Entry
115223380 CDS
T07665
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115223380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
osn03009
]
115223380
Ribosome biogenesis [BR:
osn03009
]
Eukaryotic type
Pre-60S particles
RNases
115223380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
PknG_rubred
Motif
Other DBs
NCBI-GeneID:
115223380
NCBI-ProteinID:
XP_029649748
UniProt:
A0A6P7TEV8
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Position
LG23:16525534..16610631
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AA seq
1380 aa
AA seq
DB search
MFPSSGYFRGLDCPFYASGLCERPYCHYKHSKQPPTDKDSSWIGKNVSSQRFCNVAEEPK
VVDIEKQKKSLVANELERSKNLKNQFAESNPIVKDLSKLYVYNPQASIPGLYESSTDGNT
DGKYKNYAKYCVNGTPAYQPTCDKRPKETPYDVFAQSKKKEKVKEYSCDGAVNSAPEYNP
TPISKLKRMQKYSSQSNTHSVLEYDPVSNFEAGFGNKTYLNLDNPYIATTNNKVQAPSKD
QVYKPSSVRPLASDEEDEDHELVIDAKFSDDSEDGVVDTTIYLSDEQHSDNESESRTTTG
VVKSSLYKSSNSINPTDIRSNQPVHNQTPKHTSSVSHKSINSNKTSSDSSHSKTSKSSKG
SVDLSANQSKDEKKKSESSSSGSSNSSSSNSSSKSKLEKKKSSDDKSAKEKKKAESGSKS
SEKKATNSSDSNGSSSLKETSCSKKEKKDVHLKEKHVGEKMKKPKDHHSLNSKNCQSGEQ
IEKEKDRHKGEVEKVGNVKVKLKEGRCEEVRRSNSLSSSSLLSSSSSSSSTLSVKKGNEP
ERRKSDPLYKSDSSKHEFNADQKKEHVRRKSESEKKSDGKSHQLELVKRKSESEMRKTEH
ERRKETSLHKTDADLKRKEDKKIVQNHNTTEKNRVEKIKPKKEVNVEKSCDKEKLKKLKS
KTLEINKKSVSQTSVKTEGVHSSSPEKSKKRVLSGEKSLESNKKRHCSEKHLSSSSDENH
SSKKIFTSDMASKSIKRKAPIEGQSKSSSIFSSSSSNCKLPLKKPKNSYSVSIYDLFGKD
SDEEEEGSSNTLNQSAGDESTGLSDDDELNVIFGDTDLSENDPYEECLKIFNESNNEKRQ
SNPIKNEKKKREVVRPPPSMDDGKKRVAHAAAANRQCNDKLKKLVRPVIAKPSPAQVMQN
RILEMQKRSANPMLRKDKPVIGKSLLKKVVLPKLQLKLPDMSMPESCNINVFRTVAGTAA
KTQSRVAHVPKKEVLKRPTITPDSSSKVPVAIRQRYLNLIIDEYVKLIDSEWEAMKKGEE
EEKDVYRSCNTKVGYLNKAIHLIKRLRSGCLGTLKKLLPSTNPPPAPCKETKKLEHQLTG
LALYERVKQYILTEEELRENHFPRPEGLGRSKYYISDVTKEPYLPSDERFCCRCGKTYRV
TSSGRAAVEDECLYHWAKPVRRRYGNTIETRYRCCQAEVGSTGCEVGGTHVHHKNKFDGS
SGYMITPDREMPPEGPGVFAMDCEMLYTTAGMEVARVTVVDSECNVVYETLVKPDHEILD
YNTRFSGITEEDMKGVATKLIHVQAVLLHYFSSQAILVGHSLENDLMSVKLIHSCVVDTS
VLYPHRAGRPLKRALKNLTHDYLNTTIQEGIDGHDSQEDAIAAMRLVHYKIQQDGNKYRS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgttcccctcgtccgggtatttccgtggtttagactgccctttttatgccagtggcctg
tgtgagagaccttactgccactataaacattcgaagcaaccaccaacggataaagattct
tcttggattggaaagaacgttagcagtcagcgtttctgtaatgttgctgaagaaccaaaa
gttgttgatattgagaaacagaagaagagcctggttgccaatgaactggaacggtcgaaa
aacttgaagaaccaatttgcagagagcaaccccattgtaaaggatttgagcaagttgtat
gtgtacaacccacaagccagcatcccggggttgtacgagagctccactgatggtaataca
gatggtaaatacaaaaattatgccaagtattgtgttaatggcacccctgcctatcaaccg
acctgtgataaacggccaaaggaaactccttatgatgtgtttgcacagagcaaaaaaaaa
gagaaagtgaaggagtacagttgcgatggtgccgtgaactccgctcctgagtacaaccct
actccgattagcaagctgaagcgaatgcagaagtactcttcgcagtccaacacacattcc
gttcttgagtatgatcctgtcagtaatttcgaagctggttttggtaataagacatatcta
aatttggacaatccttacatagccaccactaacaacaaggttcaagcgccaagcaaagac
caggtttacaaaccgagcagtgtgcgtccgttggcctcagacgaggaagatgaagatcac
gagcttgtaattgatgccaagtttagcgacgacagtgaagatggtgtggttgacacgacc
atttacctgtcagacgaacaacacagtgataacgaatctgaaagtagaactacaacagga
gttgttaagtcctcattgtacaaaagcagcaacagcattaaccccaccgacattcgatca
aaccaaccagttcacaaccaaaccccgaaacacacctcatctgtctcccacaaaagcatc
aactccaacaaaaccagttcagattcttcccactcaaaaaccagcaaaagtagcaagggc
tctgtcgatctctctgccaaccaatcgaaggatgagaagaagaaatcagagtcaagtagc
agtggtagtagtaatagcagtagtagtaatagtagtagtaaaagtaagctggagaaaaag
aaaagttctgatgataaatctgccaaagagaaaaagaaggcggagagtggcagcaaatca
tctgaaaagaaagcaaccaacagttctgattcgaatggcagctcttctttgaaagagaca
agctgcagtaagaaagagaagaaagatgttcatttgaaggagaagcatgttggtgagaag
atgaagaagcctaaagaccatcatagcttaaatagcaagaattgtcagagtggggaacag
attgagaaggagaaagatcgacacaaaggagaggtggagaaggtgggtaatgtgaaagtg
aaattaaaagaaggacggtgtgaggaggtccggcggagcaactccctatcatcatcatca
ttattatcatcatcatcatcatcatcatcaacattgtctgttaagaaagggaatgagcca
gaacgaagaaaaagtgatcccttgtataaaagtgattcctcaaagcatgagtttaatgca
gatcagaagaaggagcatgtaaggcgtaagagtgagtcagagaagaagagcgatggcaag
agccaccagttggaattggtgaaacgaaagagtgagtcggaaatgagaaaaacagaacat
gagcggagaaaagaaacgtccttgcataaaactgatgctgatttgaagcggaaagaggat
aagaaaattgtacaaaaccataatacaacagagaagaatcgtgttgagaagataaaacca
aaaaaagaagttaatgtcgagaagtcttgtgataaagaaaaactgaaaaaactgaaatcc
aaaactttggaaatcaacaaaaaatcggtcagtcaaacatctgtgaagacagagggtgta
catagtagctccccagaaaagtccaaaaagagggtcctctcaggagaaaaatctcttgaa
tcaaataaaaagagacattgtagtgaaaaacatctttcttcatcatctgatgagaaccat
tcttcaaagaaaattttcacctcagatatggcctctaaatctataaaaaggaaagcccca
atagaaggacagtctaaaagctcatctattttctcatcatcttcatctaactgcaaactg
cctttaaaaaaaccgaaaaatagctattcagtgagtatttatgacctgtttggcaaggac
agtgatgaggaggaggagggtagcagcaatacgttaaaccaatcggctggggatgaaagc
actggtctgtcggacgatgatgagttaaatgtgatttttggtgacacagacctttctgag
aatgatccatatgaagaatgtttgaagatttttaatgaatccaataatgaaaaaagacaa
tcaaatccaataaagaatgaaaaaaagaaaagggaagtggtgcggcctcctccatccatg
gacgatggtaagaagagagttgcacatgcagcagcagccaacagacagtgtaatgacaag
ctaaaaaagttagtccggccagtaatagccaaaccaagccctgctcaagtcatgcagaat
cgtattctagaaatgcagaaacggtcagcaaatcctatgctacgcaaagacaaaccagtc
attggaaagtctctcttgaagaaagtggtattaccaaagctgcagttgaaacttccagac
atgtctatgccagagagttgcaatattaatgtctttcgcaccgtggctggtacagctgcc
aagacacaaagcagagtggcacatgttcctaaaaaggaggtgctcaagagaccaaccatc
acaccagattccagcagtaaagttccagtggccatcaggcagcgttatctgaatctgatc
attgatgagtatgtgaaactcattgattcagaatgggaagccatgaaaaagggagaagaa
gaagagaaagatgtttatcgtagctgcaataccaaagttggttatttaaacaaagccatt
cacctcatcaaacggttgcgcagtggctgtcttggcacactcaagaagctgctgccatcc
actaacccgccaccagcaccttgcaaagagacaaagaaattagaacatcaactcacaggt
cttgccctttacgaaagagtaaaacagtatattttgacggaggaggagttaagagagaac
cactttccacgacccgaaggattgggacgttccaaatattatatatcagatgtcaccaaa
gaaccttacctgcccagcgatgagaggttttgttgccgttgtggaaaaacataccgagtt
acaagcagcggaagagcagctgtggaagacgagtgtctttaccattgggcaaaacctgtt
cgaagacgatatggaaatactattgaaactcgatacaggtgctgccaagctgaggttgga
tcaacaggctgtgaagtgggtgggactcatgtccatcacaaaaataaattcgatggttcc
tctggctacatgatcaccccagacagagaaatgcctcctgaaggtccaggtgtgtttgcc
atggactgtgaaatgctctacaccacagctggtatggaagttgcacgggtgacagtcgta
gattcagaatgtaatgttgtctatgaaactttggtgaaacctgaccatgaaattcttgat
tacaacacacgcttcagtgggatcacagaagaagatatgaagggtgtggcgaccaaactg
attcatgtccaggcggttctactccactatttctcatcacaagccatattagttggtcac
agtctggagaacgatttaatgtccgtcaagctaatccacagttgtgttgttgacacatca
gtcttatacccccatagggctggcagacctctgaagagggccctgaaaaatttgacacat
gactacctgaatacaaccatccaagaaggaattgatggacatgacagccaagaagatgct
attgccgccatgaggctggtgcattacaaaatccaacaagatggaaacaaatatcgctca
tga
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