Octopus sinensis (East Asian common octopus): 115223963
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Entry
115223963 CDS
T07665
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K08135
collagen type XV alpha
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
osn00535
]
115223963
Proteoglycans [BR:
osn00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
115223963
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Endostatin
Laminin_G_3
Collagen_trimer
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
115223963
NCBI-ProteinID:
XP_029650580
UniProt:
A0A6P7TKI2
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Position
LG2:89553194..89870643
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AA seq
1276 aa
AA seq
DB search
MVLRKYCLVVTIWLIGVLSRYDVRSQEGVEEGLLPLNSEHVDMLGVIGIPSDPVRFSTGM
DYFPAFRLLGKKEFKDNANQLFGSKAINDFALTMVVHFEKKDTSFIFAVLDPTATIVQLG
VSVSSNSQGNEQNISLYYTPITADVNTSTSSKILASFKLENLLNNWARISFMVKDDIVEV
YLNGTKKGRHQVNRDPLVLEDASSIYIGGGGPAEKNMFVGSLQELKLYSNPDVATYYEEA
ITPFRLSPRQRSSTLQAGHSESQSSKIIHLRTSELWSDYGSGSGSGRDEIIVPTHKTHIS
HTIKGEKGSRGDKGIKGEPGISQPMISPPPPLPPRSGLKGDQGLPGPKGPIGVSGQKGQK
GEKGEIVKLDLSGQGGVSVKGEKGERGMIGLTGVKGAPGKSIVGPAGKPGLPGSTGLPGP
PGPPGLPAQPIREPSSGYSGTYIDLEASGNDEMAKEKGIVGPRGPPGHTGPPGLPGLKGL
PGVKGEQGENGLNGIDGEIGRDGAKGEPGIRGHSGEPGPAGQKGEAGKNGYDGRDGLPGP
PGPPGPPSSTIRSESSGTIDDETNIDGSSEGVVTVRGEKGDPGHPGRTGHPGADGLVGQK
GERGYKGEHGLKGESGLPGEPGLRGRPGLVGRPGEKGERGRPGMKGQRGIGRVGPAGPPG
PPGPSGIPPEIKTSDGSVIINGQKGEPGRPGSTGPVGPEGITGPVGPQGIAGPPGPPGPP
GVPGLSEGYSNGKGIKGEPGGCRSCVGLKGERGPVGPKGSMGYTGKKGVKGNMGMPGFTG
RQGLRGRKGEPGYGLKGRTGERGLPGPPGIPGVSGSWKPDGSNGLHHKGDKGERGYTGRS
GPPGPPGPPGPHTSPSSGVIIPTGSGDTERIYRGEKGEKGEKGGKSETSVFDKIYYKGNA
GAPGPPGPPGPPGPPNSGGYAGSNGHSDAYRLYGQKGQKGEMGVKGNTGQGIPGIPGVSI
PGRPGLRGPPGPPGPRQHSYGGSSTINDQTYSASHAIATYRSMRELQDVALTIPVGSIAF
VHDKELLLIRLKDAWAEIQSRRIALPQYLNRIPLPVPKPSEIKSGRKTRMETTTVLTSTP
KPPEIHVLPPNLDKERYRQNQKVLRLIALNRPLTGKMGGVNTIDLFCHQQARRASFKATF
RGFLSNQIQDLKTLIYDKKERNYPIVNSKGEVLVDSWEHLISGDGGYFNSSVPLYSFDGT
NVMTSSRWPQKFVWHGSSTKGERKRDRFCSNWRSSGRNNVGVASSLLAHQFLGYEEFHCN
NNFIVLCIQIATMEQH
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggtactaaggaaatactgtttagtcgttacgatatggctgatcggagtacttagccgg
tatgatgtcagaagccaagaaggagtagaagaaggcttgttgccgttgaattcagaacat
gtcgacatgttgggagtgattggaatcccttcagatcccgtgagattctcaacggggatg
gactattttccagccttcagacttctcggcaaaaaggagtttaaagacaatgcaaatcaa
ctgtttggtagcaaagctataaacgactttgctttaacgatggtcgttcattttgaaaaa
aaagatactagctttatcttcgcagttctagaccctaccgctacgattgtacaacttggt
gtgagtgtttcatcaaatagtcaaggcaacgaacaaaacatatcgttatattacacacca
ataactgctgatgtaaatacatccacttcttccaaaatattagctagtttcaaactcgaa
aacctgctcaacaactgggcgcggattagcttcatggtaaaagacgatattgtggaagta
tatttaaatggaacgaagaaaggaagacatcaagtgaacagagatccattagttcttgaa
gatgcctcttctatctacatcggaggaggtggtccagccgaaaaaaacatgttcgttgga
tctttacaagaactgaaactttattcgaaccccgacgtcgccacctactacgaagaggct
attaccccttttcgactttctccacgtcaaagatcttcaacactacaagcagggcattct
gaatctcagtcttcaaaaattattcatcttcggacatcagagctatggtccgattatggt
agtggctcaggaagtggacgtgatgaaataatagtgccaactcataaaactcatataagt
cacacaattaaaggtgagaagggctcacgaggtgataaaggtataaaaggtgaaccagga
ataagtcaaccaatgatttcacctcctccaccactgccaccacgatcaggcttgaaaggg
gatcaaggacttcctggtccaaagggaccaattggagtttccggtcagaagggtcagaag
ggagaaaaaggagaaatagtaaaacttgatttgagtggtcaaggaggagtaagtgttaaa
ggagaaaagggagagagaggaatgattggcctcacaggagtaaagggtgcacctggcaaa
tctattgttggtcctgcaggtaagcctggtttacctggttctactggtttaccaggtcca
ccaggtcctccaggtctaccagcacagccaattagagaaccttcatctggatactcaggc
acatacattgaccttgaggcttctggaaatgatgaaatggcaaaggaaaaaggaatcgtt
ggaccacgtggacctccaggtcacactgggccccctggtcttccaggtttaaaaggattg
ccgggagtaaaaggagaacaaggagagaatggcttaaatggcattgatggagaaatagga
agagatggtgccaaaggagaacctggtatacgaggacattcaggagaacctggccctgcg
ggtcagaaaggagaagcaggtaaaaatggatatgatggtcgtgatggtttacctggccca
ccaggaccaccaggaccaccaagttcaactattcgcagtgaatcatctggcacaattgat
gatgaaacaaatattgatggtagttcagaaggggtagtaactgtgagaggagaaaaagga
gatcctggtcaccctggacgaactggacatccaggtgctgatggtcttgtaggacagaaa
ggagaacgcggatataagggagaacatggactaaagggagaatcaggactgcctggagag
cctggacttcggggtcgtcctggattagttggcagaccaggtgaaaagggggaaagagga
agacctggaatgaaaggacaaaggggaataggtcgagttggccctgcaggtccacctggc
ccccctggtccctctggaattcctcctgagattaaaacttccgatggtagtgtaataata
aatggacaaaagggagaacctggaagacctggcagtactggtccagttggacccgaggga
atcactggtccagttggaccccagggaatcgctggtccacctgggcctcctggacccccc
ggtgttcctggattatccgaaggctactccaatggaaagggtatcaaaggagaaccaggt
ggttgtcgtagctgtgttggcctgaaaggagagcgtggccctgttggaccaaaaggcagt
atgggatatacaggtaaaaaaggcgtcaaaggaaacatgggtatgcctggatttacaggt
cggcaaggacttcgtggacgaaaaggagagcctggatatggccttaaaggcagaacagga
gaaagagggctaccaggtcctcctggaataccaggtgtatcaggatcttggaaacctgat
ggttctaatggattgcatcataaaggagacaaaggtgaacgtggttatacaggccgttca
ggacctcctggcccacctggcccacctggaccacatacttctccatcatcaggagtgata
atacctacaggttctggagatacagaaagaatttacagaggagaaaaaggagaaaaagga
gagaaaggtggcaagtctgagactagtgtatttgataaaatatattataaaggtaatgct
ggagcaccaggaccaccagggcccccaggaccaccaggaccaccaaatagcggtggctat
gctggttcaaatggacatagtgatgcatatagactttatggacaaaaaggacaaaaagga
gaaatgggagtaaaaggaaatacaggccagggtattcctggaattccaggagtatcaatt
ccaggaagaccaggtctccgtgggcctccaggacctccaggacctcgacaacattcatat
ggtggttccagcacaattaatgatcagacttattctgcttcacatgcgattgcaacttat
cgcagtatgagagaacttcaagacgttgctctaactatccctgttggaagtatagctttt
gttcatgataaggaactattattaattcgactgaaagatgcatgggcagaaatccaaagc
agacgcattgcacttccccagtatctgaatcgcatcccactaccagttccaaaaccatct
gagattaaatctggcagaaaaacaagaatggaaacaacaactgtcctgactagtacacct
aaaccacctgaaatacatgtgcttcccccaaatcttgataaggaaagatatcgacaaaac
caaaaagtactcaggttgatagcattgaacagaccgctcacaggaaaaatgggtggagtt
aatacaattgatttattttgtcatcaacaagcacggagagcatcttttaaagcaacattc
cgcggtttcttatcaaatcaaattcaagatttgaaaacattaatctatgataagaaagag
cgtaattatccaattgtgaattcaaagggtgaagttcttgtggattcatgggagcactta
atcagtggagatggaggttatttcaacagctccgttccactctattcatttgatggtacc
aacgtaatgactagctcaagatggccacagaaatttgtatggcatggttcttcaacaaaa
ggcgagcgaaagagagacagattctgttccaactggcgttcatcaggaagaaataatgtt
ggtgttgcatcgtccctattggctcatcagtttctgggatatgaagagttccattgcaac
aacaatttcattgtcctatgcatacaaattgccactatggaacaacattga
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