Octopus sinensis (East Asian common octopus): 115224346
Help
Entry
115224346 CDS
T07665
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03013
Nucleocytoplasmic transport
osn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115224346
03015 mRNA surveillance pathway
115224346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115224346
03041 Spliceosome [BR:
osn03041
]
115224346
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115224346
Spliceosome [BR:
osn03041
]
Complex C
Other components
EJC/TREX
115224346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
115224346
NCBI-ProteinID:
XP_029651078
UniProt:
A0A6P7TI18
LinkDB
All DBs
Position
LG25:3466966..3480424
Genome browser
AA seq
597 aa
AA seq
DB search
MAAFVRDFNVLQQELEKTKESLKDVDDNIKKLTGRDPTEPGRTGQQRRILLGFNERGTTD
PAPNRSGRKRVLPVGKWAVTEADAAPRKKRGNIASRLGPRPSRSSQDSGDADEMVRKPSV
PSSVVATSRDSLTRKDMLDAQGKDERGMARNKRMFGLLLGTLQKFKDEAKDKKDKHDQRK
RVELKLEEKAQQEKDEIRKERELLFQIRREKQTRIRLLEQKMELVSTHEKCEAEIRKLTN
FICTKTKPCIFYLPKVHTPATESRLSESTKVVNEMIAERRRRLTAEINELMGPSSFAHLA
GDDEHGLDMEEDDSENIPAGPTGRRDGGGAGSVDGDKRYPIHYRGSSAGNKDWSRNKDKK
TSSKRSSGGGGGGGGNDHHQHHQDSKTGKHGWEVHRMSKSCKDQQSQMLQQGSTAITSSS
AVSSKSVSNKWQLLMEMDSGLEEDEERVVVPNTAVPNISLPMTPLPPTSSSSSALVARHD
EDDDDDDNRDDDDEEGEERGERGEAEEAGDKREVCIEENINGTEDRRLVDASGVASCRRV
VLAADVDDDDDDDDDDDDDDDDDRGGGGGGGGNNEDDDDDDNDEEDEGDDSNDVHKP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttcgttcgtgacttcaacgtcttacaacaagaactggagaaaactaaagag
agcctaaaagatgtggacgataacattaagaaactgaccggtcgcgatccgaccgaaccc
ggtaggaccggacagcagcgaaggattcttttgggatttaacgagcgcggtacaaccgac
ccggctcccaatcggagcggcagaaaacgtgtgcttcctgtcggcaagtgggccgtcacc
gaggccgatgcagccccccggaagaagcgtggaaacatcgccagcagactcggtccccga
cccagccgatcgtcgcaagacagcggcgatgcagacgaaatggtgcgcaaaccttcggtg
ccttcgtccgtggtggccacatccagagattcgttgactcgtaaagatatgctcgacgct
cagggcaaagacgagcggggcatggcgaggaacaaacgcatgttcggtcttttgttggga
actttacaaaaatttaaagacgaggccaaagacaagaaggataaacacgatcaacggaaa
cgagtggagctgaagttggaagaaaaagctcaacaggaaaaagatgaaattcgtaaagaa
cgtgaacttctgtttcagattcgtcgtgagaaacagactaggattcgtttattagaacaa
aaaatggaacttgtttcaacacacgaaaaatgtgaagcagaaattcgcaaactgacaaat
tttatttgtacaaagactaaaccgtgcatcttctacttaccgaaggtccacacccctgcc
accgaaagtcgcctgtcggagagtaccaaagtggtgaatgaaatgatcgccgaacgacgt
cggcgattgacagccgagatcaatgaactcatgggtccctcgtctttcgcacacttggct
ggcgatgatgagcatggcctggacatggaagaagacgacagtgagaatattccagctggt
cccacagggagaagagacggtggtggggcaggaagtgttgacggtgacaaacgttatcct
attcattaccgcggcagttccgcaggtaacaaagactggtcaaggaacaaagacaaaaag
acatcgtctaagaggtcatcaggtggtggtggtggtggaggaggaaatgatcatcatcaa
catcatcaggattctaaaactggtaaacacggatgggaggtgcaccgaatgtcaaaatct
tgtaaagatcaacagtcacagatgctgcaacagggttccacggccatcacctcttccagt
gcagtctcttctaagtcagtttcaaataaatggcagttgttaatggaaatggacagtggc
ttagaagaggacgaggaacgggttgtagtacccaacactgcagttccaaacataagtctg
cctatgacaccactaccgccgacgtcgtcatcatcttcagcgcttgtagctcgacatgac
gaagatgatgatgatgatgacaaccgtgacgacgacgacgaagaaggagaagagcgcggc
gaacgtggtgaggcggaagaggctggtgacaaaagggaagtttgtatagaggaaaatatt
aatggcaccgaggacaggcgcctggtagatgctagcggtgttgccagctgccggagagtc
gttttggcagcagatgttgatgatgatgacgatgatgatgatgatgatgacgacgacgac
gatgatgatagaggaggcggaggtggtggtggtggtaataatgaggatgatgatgatgat
gacaatgatgaggaagatgaaggggatgatagcaatgatgtccataaaccctaa
DBGET
integrated database retrieval system
