Octopus sinensis (East Asian common octopus): 115224401
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Entry
115224401 CDS
T07665
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115224401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osn03019
]
115224401
03012 Translation factors [BR:
osn03012
]
115224401
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115224401
Messenger RNA biogenesis [BR:
osn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115224401
Translation factors [BR:
osn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115224401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
ATPase
cpSF2-GREB1
AAA_19
PhoH
ABC_tran
NPHP3_N
TsaE
Motif
Other DBs
NCBI-GeneID:
115224401
NCBI-ProteinID:
XP_029651156
UniProt:
A0A6P7TQC0
LinkDB
All DBs
Position
LG25:17000613..17057605
Genome browser
AA seq
1097 aa
AA seq
DB search
MNFPIFRSMRLSFHALRMSYRERGRRSFDQGYGGGRHGGGGHGRGGRKYQDYDSADNGRG
RKNFDRDFGGNHMRGSRRLNDQGNNDSADNGPHRHPPGLKGKEIGLWYSRRSRAKKEMQD
KQQRPMIKMDSRQENNIRDILDQFGSGPSSSSHPHQYHPSSHHTTDIRDCRDNDRTQKAS
SDDWFNMDSAHEETKPNSSSKSLESPVWHTSSPRIKENAYNKDGDNDEGEVGHDDNDNVE
MSSQLAERSNSCDILASVTEVMKFYKEETDYGIDPASDDFVPSSSIKCNPSLDAAYQKDL
QERSKSTSYQKMLQFRKKLPSYDMRKELVDKIQNNQVVVISGETGCGKTTQVPQFILDDY
LEQGMGSTCSIICTQPRRISAVSVAQRVADERDVACGQGSEVGFQIRLERELPRERGSIL
FCTTGIVLKWLESDPSLLRASHIILDEIHERDLLSDFLMVIIKDLLVTRPDIKVILMSAT
LNAEMFSIYFGGAPMINIPGFTYPVKEYYLEDVLEMTNYQPPEAKRPKWGMRGMANARKE
ETERQQMKDWIRETIQGSYSPATCHSLASMDHKFIDIELVAELIKYICYKKEDGAILVFL
TGWEEIRKTNDLLNKDPTFNSRNFRIIPLHSLMPTVNQREVFNRPPVGVRKIVLATNIAE
TSITIDDVVYVIDCGKIKVKHFEPEKNLTSLEPQLVSKANAKQRRGRAGRVQPGECYHLY
SSFTETTLDDYLLPEMLRTRLEELCLQIKLLKLGKIIPFVEKAIQTPSLQALNSAIKILQ
DLNALDQDENLLPLGKHLARMPVDPHSGKMILFGAMFCCLDPILTVAASLSFKDAFVIPL
GKEKAADQQRKMLAEGSKSDHIMLINAYKGWRKSVAGRYDYSYCHQNFLSSNTLKLLKEM
KGQFASLIHQLGFISQPNPSERNANKNSDNLELIKAIICAGLYPNVAKVQKPSMGKRPTI
LQTKIEKRVSLHPKSVNSTESVFESKWLIYHQMLKTSGIYLHDCTIISPYPLLFFGGPIG
IKRDGDQDCITVDEWIVFQASPKTAALVKDLRTELDQLLEEKISTPGPTDWGVSKKEGAL
MKAIIDLVIQPCPSPQF
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcccaatattccgttcaatgcgtttatcttttcacgcattgagaatgtcatat
cgggaaagaggtcgccgatcctttgatcagggctatggtggaggaagacacggtggaggt
ggccacggaagaggcggtcgaaagtaccaggactatgacagtgctgacaatggaagaggt
cgtaaaaatttcgaccgagactttggtgggaatcacatgagaggcagtcgaaggcttaac
gatcaaggcaataatgacagtgcagataatggtcctcacagacatccacctggcttgaaa
gggaaagagattggattgtggtacagtcgacgcagtcgcgccaagaaggaaatgcaagac
aaacagcaacgtccaatgataaaaatggacagtcggcaggaaaataacatccgggacatc
ttggatcagtttggatccggcccatccagcagctctcaccctcatcagtaccaccccagt
tcccaccacaccactgacatcagggattgccgtgacaacgacagaacacagaaagcctca
tcggacgactggttcaacatggactcagcccacgaggagaccaaacccaacagcagcagc
aagtcattggaatctcccgtttggcacacctcgtctccaagaatcaaggaaaatgcttat
aataaagatggcgacaacgacgagggtgaagttggtcacgatgacaatgataatgtcgaa
atgtcatcgcagttggccgagagaagcaacagctgtgacatcttggcttctgtcacagaa
gtgatgaagttttacaaagaagaaaccgattatggaattgatccagcatcggatgacttc
gtgccaagttccagtatcaaatgcaatccttcgctggatgcagcataccagaaggacctc
caagaacggtcaaagagtaccagctaccaaaaaatgcttcaatttcggaagaaattgcca
tcatacgacatgagaaaggaacttgtagataagattcagaacaaccaagtggtggtcatt
agtggagagactggttgtggtaaaacaactcaggtacctcaatttatcttggacgactac
ttagaacaaggaatgggttcaacgtgtagcatcatctgcacacaacctcggcgaatcagc
gctgtttctgttgctcaaagagttgccgatgaacgtgacgtagcatgcggacagggcagc
gaagtggggttccagattcgcttggaaagggagcttccacgagagagaggatccatacta
ttctgtacgactggtattgtgctgaaatggctggaatctgatccgtcgttactccgggcc
tcacacattatccttgacgagatccacgaacgggatcttctctcggacttcctcatggtc
atcatcaaagatctcttggtcactcggccggacattaaagtgattttgatgagtgcgacc
ctcaacgcagaaatgttctccatctactttggtggtgcccccatgatcaacattcctgga
tttacttacccagtcaaagaatactatttggaagacgtcttagaaatgacaaattatcag
ccacctgaagccaagcgtccgaaatggggcatgagaggaatggctaatgccaggaaggaa
gaaacggaaagacagcaaatgaaggattggattcgtgagacaatacaaggaagctacagc
cctgctacctgtcactcccttgcttctatggaccataaattcattgatatcgaactcgtt
gctgaacttatcaagtatatttgctacaagaaagaggatggtgccattcttgtattcctt
actggttgggaagaaatccgaaaaaccaacgacctcctcaacaaagatcctacattcaac
agtcggaatttccgcattatcccattgcattcattgatgccaactgtaaaccagagagaa
gtgttcaaccgacccccagtaggggttcgcaagattgtactggctacaaacatcgcggag
acaagtattactattgatgatgttgtctacgtcatcgattgcggaaaaatcaaggtgaaa
cattttgaaccagagaaaaacttaacatcgcttgaaccgcaactggtgtccaaagcaaat
gctaaacagcgccgtggacgagcaggcagagtgcagccaggtgagtgttatcacctgtat
tcctcatttactgagacaacactggatgactatctcttacctgaaatgttgagaacacgg
ctagaggaactctgcttacaaattaagttattgaagttgggaaaaattattccatttgtg
gagaaagcgatccagactccgtcattacaagcattaaactcagccatcaaaatcttacaa
gacctgaatgctctcgaccaggatgaaaacctcctcccactgggcaaacacttggcccgc
atgcctgtcgacccacattccggcaagatgatcctgtttggtgccatgttttgttgcctt
gaccccatcctcacagttgctgccagcttgagctttaaagatgcttttgttatccccttg
ggaaaggagaaagcagcggatcaacagcggaagatgttggctgaaggaagcaagagcgac
cacattatgttaattaatgcatacaagggttggagaaagtctgtggctggacgttatgat
tattcctactgtcaccagaactttctctcttccaacacacttaagctgctgaaagagatg
aagggtcagtttgcatccctgatccaccaacttggcttcatatcacaaccaaatccatca
gagagaaatgctaacaaaaattctgataacctggagttgataaaagctattatttgtgcc
ggtctttacccaaatgttgccaaagtacagaaaccttcgatgggtaaaagacccaccata
ctacagaccaagatagagaagagggtctccctccacccgaaatctgtcaattccacagaa
tcagtgtttgaatcaaaatggttgatttaccaccaaatgttgaagacgtcagggatctac
ctccatgattgtaccattatctcaccctacccacttctattctttggtggaccaataggc
atcaaaagggatggtgaccaagactgcatcacggtggatgaatggatcgttttccaggcc
tctccaaaaacagcagctcttgtgaaggatttacgcacagaactggatcaattgctcgaa
gagaaaatcagcaccccgggccccaccgattggggtgtgagtaagaaggaaggggcctta
atgaaggccattattgatcttgtcatccagccatgcccatcaccacaattttaa
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