Octopus sinensis (East Asian common octopus): 115225722
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Entry
115225722 CDS
T07665
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03022
Basal transcription factors
osn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115225722
09124 Replication and repair
03420 Nucleotide excision repair
115225722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115225722
03036 Chromosome and associated proteins [BR:
osn03036
]
115225722
03400 DNA repair and recombination proteins [BR:
osn03400
]
115225722
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115225722
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115225722
Chromosome and associated proteins [BR:
osn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115225722
DNA repair and recombination proteins [BR:
osn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115225722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
nSTAND3
AAA_11
DUF6272
Motif
Other DBs
NCBI-GeneID:
115225722
NCBI-ProteinID:
XP_029652507
UniProt:
A0A6P7TT30
LinkDB
All DBs
Position
LG28:complement(7019375..7069091)
Genome browser
AA seq
760 aa
AA seq
DB search
MRLNIDGLLVYFPFDYIYPEQYLYMTELKKSLDAKGHCALEMPSGTGKTVSLLSLITAYM
RSHPLDVTKLIYCSRTVPELEKVVEELKVVMKYYEKETNEKPNILGLALSSRKNMCINQE
VLSHRTGKVIDSKCLALTASYVRKQHKYNEKIPVCEFYEEFDARGRTTPMEPGVYNLDDL
KDYGRKKKCCPYFFTRYMIQQANIIIYSYYYLLDPKIAAVVSNELNKSSVVVFDEAHNID
NVCIESMSVTINRQILDRCCNSIEKLKKHVEKIRETDENKLKEEYHKLVEGLKDARIAKE
TDVILSNPVVPTEILQEAVPGNIRNAEHFLAFMKRFVEFLKTRLRIQHVVSESPPSFLKD
CSQKVCIERKPLRFCSERLQSLMRTLELTDIDDFSSLSLISNFATLVSTYAKGFIIIIEP
FDDRTSTYTNPVMHFNCMDASIAIKPVFDRFQTVVITSGTLSPLEMYPRILDFHPVIMAT
FSMTLARPCILPIVVSKGNDQVAMSSKFETREDIAVIRNYGNLLVDLCRIVPDGIVGFFT
SYSYMETIVASWYETGIIDSLQKNKLLFIETQDAAETSLALFNYQKACENGRGAVLLSVA
RGKVSEGIDFEHHFGRAVIMFGVPYVYTQSRILKARLEYLRDNYQIRENDFLTFDAMRHA
AQCVGRVLRGKTDYGIMVFGDKRYSRADKKSKLPLWIQEHLKDSFCNLSTDEAVQVSKWF
LRQMAQPFSKEDQLGLSLLTLEQLEAEEMQSKLEQCTQYV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaggttaaacattgacgggttattggtttactttccatttgattacatctaccctgaa
cagtacctttatatgaccgagttgaagaaaagccttgatgctaagggccattgtgcattg
gaaatgccatcaggaaccggcaaaactgtatcactgctcagtctcattacagcttatatg
aggagccaccctttagatgtcacaaaattaatatattgctccagaacagttccagaactg
gagaaggtggtggaagaattaaaagttgtaatgaaatattatgaaaaagagacgaatgag
aaaccaaatatccttggcctcgctctgtcttccaggaagaacatgtgtatcaatcaggag
gttctctcacatcgaactggcaaagtaattgatagtaagtgtctggcattaacagcatcc
tatgtccgtaagcaacacaaatacaatgagaagatcccagtctgtgagttttatgaagaa
tttgatgctcgtggcagaacaacacctatggaaccaggtgtatataacttggatgatttg
aaagattatggccgaaagaaaaaatgctgtccctatttctttacaagatatatgatccag
caagccaacatcatcatctacagttattattatcttctcgatccaaaaatcgcagcagtt
gtctccaatgaattaaacaagagctctgtggttgtctttgatgaggctcacaacattgat
aatgtctgtatagagtctatgagtgtgacaatcaaccgacaaattctggacagatgttgc
aatagtattgagaagttaaagaaacacgtagaaaaaatccgagagacagacgaaaacaaa
ctaaaagaagaatatcacaaactggtggagggtttgaaggatgcaagaattgccaaagag
actgacgtgatcttatccaatccagtggttcctaccgaaattcttcaagaagctgtgcct
ggaaacatccggaatgcagaacatttcctggcctttatgaagcgttttgtggaattcttg
aaaaccagacttcgtatccagcacgtcgtttccgagagtccaccttctttcctcaaagat
tgttctcagaaagtttgtattgaaaggaaacccctcagattctgcagtgaacgtcttcag
tctttgatgagaactctggaactgaccgacattgatgacttctccagtctgagtctcata
tcaaactttgccactctggtcagtacttatgctaaaggtttcataataatcattgaacca
tttgatgacaggacctccacatacacaaacccggtgatgcacttcaattgtatggatgcc
tctatcgctattaaaccagtctttgacagattccagacagttgttatcacatcagggacg
ttatcccctcttgagatgtaccccagaatcttggacttccatccggttataatggcaaca
ttctctatgacgttagcaaggccctgtattcttccaattgtggtgagcaaaggaaacgac
caagtagccatgagttccaagtttgaaacaagagaagacattgctgtcatacggaattac
gggaaccttttggtggatctctgccggattgtccctgacggaattgtgggcttttttaca
agctattcttacatggaaacgattgttgcttcttggtacgaaacgggaattattgacagt
ttacaaaagaacaaacttttattcattgaaactcaggatgcagccgagaccagcctggct
ttgtttaattaccagaaggcctgtgaaaatggacggggagctgtcttactttctgtagcc
agaggcaaagtttcagagggaattgattttgagcaccatttcgggagagctgtgattatg
tttggtgttccttatgtctacactcagagcagaatcttaaaggcgcggctggaatatctt
cgagataactaccagattcgagagaatgacttcttaacctttgatgccatgagacatgca
gctcagtgtgtcggcagagttcttcggggtaaaacagattatggaatcatggtttttgga
gataaacgttattctcgagcagacaagaaaagtaagcttcctctgtggatccaagaacat
ttgaaggacagtttctgtaacctctccaccgatgaagctgtccaagtatcgaagtggttc
cttagacaaatggctcaacctttcagtaaggaagatcagcttggtttgtctttgctaacg
ctggaacagctggaagcagaagagatgcagtcaaaactggaacagtgtactcaatacgtg
taa
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integrated database retrieval system
