Octopus sinensis (East Asian common octopus): 115225821
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Entry
115225821 CDS
T07665
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03022
Basal transcription factors
osn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115225821
09124 Replication and repair
03420 Nucleotide excision repair
115225821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osn03021
]
115225821
03400 DNA repair and recombination proteins [BR:
osn03400
]
115225821
Enzymes [BR:
osn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115225821
Transcription machinery [BR:
osn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115225821
DNA repair and recombination proteins [BR:
osn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115225821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SUN
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
115225821
NCBI-ProteinID:
XP_029652651
UniProt:
A0A6P7TUZ5
LinkDB
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Position
LG28:complement(7704667..7764485)
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AA seq
797 aa
AA seq
DB search
MGGSKRSRKEREEKKAAKRFKGEDLDYDDEGDEEVDPNDVPAVAAARVEEKSNEDEFGAK
DYRKILELKTDHSSRPLWVAPDGHIFLESFSPVYRHAHDFLIAISEPVCRPEHIHEYKLT
AYSLYAAVSVGLQTNDIIEYLRRLNKTTLPDGIVEFIKLCTISYGKVKLILKHNQYFVES
QMPDVIQKLLKDPVVQDCRLRAETEDLALTVLEGANNPATTNAEKAIGGPNKFPGALSSS
ADKTGTDGASTSNGTGTTQASAQENVPDDIFKYFEKIDQDDEEETDSKIVSFEVIQDKIE
VLQKRCIELEYPLLAEYDFRNDSHNPDINIDLKPSTMLRPYQEKSLRKMFGNGRARSGVI
VLPCGAGKTLVGVTAACTVRKRCIVLCTSGVAVEQWRSQFKMWSTANDGIICRFTSDAKD
KPNDCSICISTYSMLAHTNKRSWEAEQMMQWLQSKEWGLMVLDEVQTIPAKMFRRVLMIV
QAHCKLGLTATLVREDDKIADLNFLIGPKLYEANWMELQNKGFIAKVQCAEVWCPMTPEF
YREYLHTHSQKRLLLYTMNPNKFQSCQFLIQFHERRNDKIIVFSDNVFALKNYAIKLNKP
YLYGPTSQGERLQILQNFQHNPKVNTIFVSKVADTSFDLPEANVLIQISAHGGSRRQEAQ
RLGRILRAKKGAAAEEYNAYFYSLVSQDTLEMQYSMKRQRFLVNQGYSYKVITKLAGKEK
DKLGYSSKEEQLQLLQKVLAATDADAEEEIDGVMRPMYIRKGGSMSSMSGADDAFYLEYS
HRKDNKHQHPIFKHFRK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggggggcagcaagaggagccgaaaagagagagaagaaaagaaagctgccaaacgattc
aaaggtgaagatcttgactatgatgatgagggtgacgaggaagtggatccaaatgatgtc
ccggctgttgcagcagccagggttgaagaaaaatccaatgaagacgaatttggcgctaaa
gattaccgaaagattctcgagttgaaaaccgatcattcatcccgtcccctttgggtggct
cctgacggtcatatcttcttggaatcattcagccctgtttaccgacatgctcatgatttc
cttattgccatctcagagccagtctgtcgacccgaacatattcatgaatataaattaacc
gcatactctctatatgcagctgtgtctgtgggtttgcagaccaacgacatcattgaatat
ctgcgtcgactgaacaagacaaccttacctgatggcattgtcgaattcatcaagctttgt
actatcagttatggtaaagtgaaactcatcctcaaacacaaccaatattttgttgagagt
caaatgcctgatgtgatccagaaattattgaaagatccagtggtccaagactgtcgcctt
cgagctgaaacagaggatctagcattgacagtcctagaaggggctaacaaccctgctacc
accaatgctgagaaagcaattggtggtcccaacaagtttcctggtgccctgagcagctct
gcagacaaaacaggaacggacggcgccagcacaagtaatggcacaggcacaacacaggcg
tcagcacaagagaacgtaccagatgatattttcaaatactttgagaagatcgatcaggat
gatgaggaagaaaccgattcaaaaattgtttcttttgaagttatccaagacaagattgaa
gttcttcaaaaacggtgtattgaactggagtatccactcttggccgagtatgactttaga
aacgattctcacaacccagatatcaatattgatctgaagccaagcaccatgttacgtcct
taccaagagaagagtcttcgtaaaatgtttggtaatggtcgggccaggtcaggggtcatt
gttttaccctgcggtgctggcaagaccctagttggagtaacagctgcctgtacagtaaga
aaaaggtgtatagtgttgtgcacctcaggtgttgctgtggaacagtggcgatctcagttc
aaaatgtggtcaactgccaatgacggcatcatctgtcggtttacttctgatgctaaggac
aaacctaacgattgttccatatgtatcagtacttattccatgttggcccacacgaacaaa
agatcttgggaagctgaacagatgatgcagtggttacaaagcaaagaatggggcctcatg
gtcttggatgaagtacagacaatcccagccaagatgtttcgtcgggtcctcatgatagta
caagctcattgcaagcttggtttaacagctaccctggtacgagaggatgacaagattgct
gaccttaacttccttattggccccaaattgtatgaagccaactggatggaactgcagaat
aagggattcatagccaaagtccagtgtgctgaggtctggtgccccatgactccagagttc
tatagagaatacctccatacacactcacagaagagattgcttctctacacaatgaacccc
aacaagttccagtcctgccaattcctaattcagttccacgagagaaggaacgacaaaatt
attgtcttctcagacaatgtattcgccttgaagaactacgccattaaactgaacaaacct
tacctctatggaccaacatcgcagggagaacgactacaaattctacaaaatttccagcac
aacccaaaagtcaacaccattttcgtctccaaggttgcagatacgtcatttgatctccca
gaagccaatgttctcatccagatttcagctcatggtggctcacgacgacaggaggcacag
cggttgggtagaattttacgagctaagaaaggagctgccgctgaagaatacaacgcctac
ttctattctttggtgtcgcaagacacattggagatgcagtattcgatgaaacgacagcgg
tttttggtaaaccagggttacagttacaaagtgatcaccaaattagccgggaaggaaaag
gacaaactgggctatagctccaaggaagaacagctgcaacttctacagaaagttctggca
gccactgatgcggatgctgaagaagaaattgatggtgtaatgagacccatgtatattcgc
aaaggtggcagcatgagttcaatgtctggggcagatgatgcgttctatcttgaatacagc
cacaggaaagacaacaaacaccagcatcccatcttcaaacatttccgcaaatga
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integrated database retrieval system
