Octopus sinensis (East Asian common octopus): 115226076
Help
Entry
115226076 CDS
T07665
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
osn
Octopus sinensis (East Asian common octopus)
Pathway
osn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115226076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115226076
Spliceosome [BR:
osn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
115226076
Complex C
U5 SnRNP specific factors
115226076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
115226076
NCBI-ProteinID:
XP_029652910
UniProt:
A0A6P7TSP4
LinkDB
All DBs
Position
LG29:9880041..9944124
Genome browser
AA seq
2373 aa
AA seq
DB search
MAFPYVFTPTGQPLLLTGQPVLITGQQPMQMQLAPQLQPQPPPQLPPMPQPPPQPAQPKP
PDYMSEEKLQEKARKWQQLQSKRYADKRKFGFVDAQKEEMPPEHVRKIIRDHGDMTNRKF
RHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVVEPIYI
AQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQLELDTDEDK
AVMNWFYEHKPLADTKHLNGSTYRHWNLSLPIMSVLYRLANQLLTDLVDENYYYLFDLKS
FFTAKALNLAIPGGPKFEPLVKDKELQDEDWNEFNDINKIIIRQPVRTEYRIAFPYLYNN
IPFQVHLSWYHKPNVVYIKTEDPDLPAFYFDPLINPISHRHATKGTEPLPDDDEDFELPD
YVQAFMQETPLYTDNTANGISLLWAPRPFNLRSGKTRRAIDVPLVKSWYREHCPAGMPVK
VRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQTTQLDWVEVGLQVCRQGYN
MLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHV
QYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVG
KGPGCGMWSAGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHYD
LELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRY
VKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYIT
AEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQRE
ELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYL
DQYLWYEADKRRLFPQWIKPADTEPPPLLVYKWCQGINNLQDVWDTAEGECNVLLESKFE
KMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFSSFIVQ
FYGLVMDLLVLGLHRASEMAGPPQMPNDFLTYQDVTTETAHPIRLFCRYIDRIHIFFRFT
AEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLP
RSVTTIQWDNSFVSVYSKDNPNLLFNMSGFECRILPKCRTTHEEFTHRDGVWNLQNEVTK
ERTAQCFLRVDEESMNRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQ
ELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRW
SKQTDVGITHFRSGMSHDEDQLIPNLYRYIMPWESEFIDSQRVWAEYALKRQEANAQNRR
LTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTEFKQYQVLKQNPFWWTHQRHDG
KLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQ
RSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLW
QKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFATYKWNVSRP
SLLADSKDVMDNANTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVL
IAIDLAYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPY
LSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII
HTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNI
VIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRA
LHVNNDRTKIILKPDKTTITEPHHIWPALGDEEWIKIEVQLKDLILADYGKKNNVNVASL
TQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQTQLTATTTRTVNKHGDEIITSTTSNY
ETATFASKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFIIISDLRA
QIAGYLYGVSPPDNPQVKEIRCIVMPPQWGTHQRVHLPNMLPEHEYLQEMEALGWVHTQP
NELPQLSPQDITTHAKVMADNPTWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNT
DTGNNPKGYLPSHYEKVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYDLQLANPK
EFYHEVHRPSHFLNFSALEDAENVGADREDLYT
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttccctacgtgttcaccccgaccggtcagccactgttgctgactggtcagccg
gtgttgatcactggtcaacaaccaatgcagatgcaactggcacctcagctacaaccacaa
ccacccccacagttaccacctatgccacagccgccaccacagccagcgcagccgaaaccc
ccggattacatgtcggaggagaaactgcaggagaaagctcgtaaatggcagcagctgcag
tcaaagagatatgcggacaaacgcaagtttggatttgttgatgcccagaaagaggagatg
ccccctgagcatgtacgcaagatcattcgggatcatggtgacatgaccaacaggaagttc
cgacatgacaaaagagtctatttaggagccctcaaatacatgccccatgctgtcatgaag
ctgctggagaacatgccgatgccctgggaacagatccgagatgtgaaggtcctctaccat
atcaccggtgccataacatttgttaatgaaatcccttgggttgtcgagcctatctacatt
gcacagtggggctctatgtggattatgatgaggcgagagaaacgggatcgtcgccacttc
aagagaatgcgattcccaccctttgatgatgaggaaccacccctagactacgctgacaat
gtgctggatgttgaacctttggaagccatccaattagagctggatactgatgaagacaag
gcagtgatgaactggttctatgaacacaagccacttgctgataccaaacacctaaatggc
tcaacttatcgccattggaacctctcgctgccaataatgtccgttctgtaccgcttggcc
aaccaactcctcaccgatctcgtcgacgaaaactactattacctctttgatctcaaatca
ttcttcacagccaaagctctcaacttggccattcctggtggcccgaaattcgagcctttg
gtcaaggataaggaacttcaggacgaggactggaatgagtttaacgacatcaacaagata
attatccgacagcctgttcgcacagaatatcggattgcatttccatatctttacaacaac
attccttttcaggtgcacctctcctggtaccacaagcctaacgtggtttacatcaagaca
gaagatcctgacttacctgctttctattttgaccccttgataaaccccatctctcacaga
catgccaccaaaggtactgaacctttgccagacgacgatgaagatttcgaacttcctgac
tatgtgcaagcctttatgcaggaaaccccgctctacactgacaacacagctaatggcatc
tccttgctttgggccccaagaccgttcaatttgcgctctggtaaaacccgcagagccatt
gatgtaccattagtaaaatcatggtaccgggaacactgccccgctggaatgcctgtcaaa
gtgagggtctcctaccagaagttattgaaatattacgtgctgaacgccctcaaacatcga
ccaccaaaggcccaaaagaaaagatatctgttccgctcgttcaaggcgaccaaattcttc
cagacgacccagttggactgggtggaggttggcctgcaggtgtgtcgtcaggggtacaac
atgctcaatctcttgatccatcgtaaaaacctcaactatcttcatttggactacaacttc
aacctgaaacccgtcaagaccctcaccacaaaggagaggaaaaaatctcgtttcggcaat
gctttccatctgtgtcgagaaatccttcgtttaacaaaactggtggtggatagccatgta
cagtatcgtcttggcaacgttgatgccttccagttagccgatggattgcaatacatcttt
gcccacgttggtcaactcactggtatgtaccggtacaaatacaaactgatgcgacagatt
cggatgtgcaaggatttgaaacatctcatctactacagattcaacacaggtccagttggt
aaaggaccaggatgtggaatgtggtcagcagggtggcgtgtttggttgttcttcatgcga
ggaataaccccgctgctggaacgctggcttggcaacttgctgtcccgacagttcgaggga
cgacattcaaagggcgtggccaaaactgtgacgaaacaacgtgtggagagtcactacgat
ctggagttgagggcggctgtcatgcacgacatcctcgacatgatgccagaaggaatcaag
cagaacaaagccagaaccattctgcagcatctcagtgaagcctggcgctgttggaaggcc
aatattccttggaaggttccaggcctccccattcccattgaaaacatgattctccgatac
gtgaaggccaaagcggattggtggaccaacacagcccactacaacagagagagaatccga
cgtggtgccacggttgacaagactgtgtgcaagaagaaccttggacgtctcactcgactc
tacctgaaggcggaacaagaacgacagcacaattacctgaaggacggtccttacatcacc
gctgaagaagctgtggctatttacacgaccaccgtacattggttggagagccgacgcttc
tcaccaattccgttccccccgctgtcctacaaacacgacaccaaattactgatccttgcc
ctggagagactgaaagaagcttacagtgtgaagagccgtctgaaccagtcccagagagaa
gaacttggcctcattgaacaggcttatgacaaccctcacgaggccctgtctcgtatcaaa
cgtcacttgttgacgcagcgagcctttaaagaggtgggtattgaattcatggacctgtac
agccacctggtgccggtctatgatgtggaaccacttgagaaaattaccgatgcctacctt
gaccaatacctctggtatgaagctgacaaacgccgtctcttcccccagtggatcaaacca
gcagatacggagcctccaccccttctcgtatacaaatggtgtcagggtatcaacaacctc
caagatgtctgggacacggcggaaggtgaatgcaacgtgctactggagtctaaatttgag
aaaatgtacgagaaaatcgatttgactttattgaacagacttctacgattgattgtcgat
cacaacattgctgattacatgacggccaaaaataacgtcgtaatcaactacaaggacatg
aaccacacaaattcgtacggcatcatccgaggcttgcagttctcctcattcattgtccag
ttctatggactggtcatggacctgcttgtgctgggcctgcaccgtgccagcgagatggcc
ggacccccacagatgccaaatgacttccttacatatcaggatgtgactacagagactgcc
catccaataagactgttctgtcgttatattgacaggatccatatattcttcaggttcact
gcagaggaagctagggacctcatccagcgctacctcactgaacaccccgaccccaacaac
gaaaacattgtcggttacaacaataagaagtgttggccacgggattctcggatgagactg
atgaaacacgatgtcaacttgggtcgagctgtgttttgggacatcaagaaccgactgccg
cgctccgtcaccaccatccagtgggacaacagcttcgtgtcagtctacagcaaggacaac
ccgaacctactgttcaacatgtcgggcttcgaatgtcgcatcctgcccaagtgccgcacc
acccatgaggagttcacccaccgcgatggcgtgtggaacctgcaaaacgaagtgaccaaa
gagaggacggcacagtgctttttgcgcgtcgacgaggagtcgatgaaccgcttccacaat
cgtgtccgccagattctgatggcttcaggctcaaccactttcaccaagatcgtcaacaaa
tggaacacggccctaatcggtctgatgacctacttccgtgaggctgtcgtcaacacccag
gagctactcgacctgctggtcaagtgcgagaacaaaatccagacccgtatcaagatcggc
ctcaactccaagatgcccagccgtttcccgccggtcgtcttctacacaccgaaagaactg
ggcggtcttggaatgttatccatgggccacgtcctcattccacagtcagatttacgctgg
tcgaagcagacggatgttggaatcacccatttcagatcgggtatgagccatgatgaggac
cagctcatccctaacttgtacagatacatcatgccatgggagagtgaattcattgattct
cagagagtatgggctgagtacgccctcaaaagacaagaagctaatgcacaaaacaggaga
ctgacactggaagatttggaagacagttgggatcgtggtatacctcgtatcaacaccctg
ttccagaaggaccgacacaccctggcctatgacaagggctggcgtgtcaggacggagttc
aaacagtaccaggtgttaaaacagaacccattctggtggacccatcagaggcatgatggg
aaactgtggaacctgaacaactaccgaacagacatgatccaggcccttggtggcgtcgag
ggcatcttggaacacactctattcaaaggaacatactttcccacctgggaaggtcttttc
tgggaaaaggccagcggatttgaagaatcaatgaaatacaagaaactgaccaatgcccag
cgatctggtttgaaccagatccctaatcggcgcttcaccctgtggtggtcaccaacaatc
aacagagccaacgtctacgttggtttccaagtccagcttgacttgactggtatttttatg
cacggcaaaatcccaaccctgaaaatctccttgatccagattttccgtgcccatttatgg
cagaagatccacgagagcgtcgtgatggatctgtgccaagtgtttgaccaggaactggac
gctctggaaatcgagacggtccagaaagaaaccattcatccccgtaagtcgtacaaaatg
aacagctcctgcgccgacatcctactctttgccacctacaaatggaatgtctcacggcca
tcactactcgccgattccaaggacgtcatggacaatgccaacacccaaaagtactggatt
gacgtccaactccgatggggcgactacgactcgcacgacattgagaggtacgctcgggcc
aagtttctggactacaccactgacaacatgagcatttaccccagtcctaccggtgtgctc
atcgccatagaccttgcctataatctccacagtgcctatggtaactggttccccggctgc
aaacccctcattcaacaggcaatggccaaaatcatgaaggccaaccctgccctgtatgtg
ttgcgggagcgcatccgtaaaggtttgcagctgtactcttctgaacctactgagccctac
ctcagctcccagaactatggtgagcttttctccaaccagataatttggtttgttgatgac
accaatgtctacagagtgacgatacacaagacgtttgaagggaatttaacaacgaaaccc
atcaacggagccattttcattttcaaccctcgaaccggtcagttgttcttgaagatcatt
cacacttcagtgtgggctggtcaaaaacgtttaggccagttggccaagtggaaaactgca
gaggaagttgcggctttgattcgttcccttcctgttgaggaacaacccaaacagattatt
gtcacccgtaaaggaatgttggatcctctcgaggtccatttacttgatttccctaacatt
gtcatcaaaggaagtgagctacagttaccattccaagcctgtctaaaggttgagaagttt
ggcgatctgatcttaaaggccactgaacctcagatggtgttgtttaacctgtatgatgac
tggttgaagactatttcatcttatactgcattctctcgactcatcctgatattgcgtgcc
ctccatgtgaacaatgaccgcacgaaaattatcttgaaacctgacaagaccaccatcaca
gaacctcatcacatctggccagcccttggtgatgaagagtggatcaagattgaagtccag
ctcaaggatctcatcttagctgattatggcaaaaagaacaatgtcaatgtagcatccctg
acccagtctgaaattcgagacattattctcggtatggagatctcggcgccatcggcccag
cgccaacagattgccgaaattgaaaaacagacaaaggagcagactcagctgaccgccacc
acaacccgcactgtgaacaaacacggtgacgagatcatcacctcgacgacgagcaactac
gaaacagcgacatttgcctccaagacggagtggcgcgttcgagcgatctccgcaacgaac
ctgcacctgcgtaccaaccacatttatgtgtcatccgatgacatcaaagagacgggctat
acatatattctgcccaagaacatcctgaagaagttcatcatcatctctgatttgagggcc
cagattgctggctacctgtacggagtcagtcctccggataacccccaggtaaaggagatc
cgctgtatagtaatgccaccccagtggggcactcaccaaagagtccatctacccaatatg
ttaccagagcacgagtatttacaggaaatggaagccctaggctgggtccacactcaacct
aatgaactgccgcagctttcacctcaagacatcaccacccatgcaaaggttatggcagac
aaccccacctgggacggcgagaagacagtcatcatcacctgcagtttcacgccaggttcc
tgttcactcactgcctacaaactgacccctagcggttacgagtggggtcgacagaacacc
gacacgggtaacaaccccaagggttacctaccgtcccactacgagaaggtacagatgtta
ctctccgaccgattccttggattcttcatggttccggcacagagttcctggaattataac
tttatgggtgtccgacacgaccccaacatgaagtatgacctacagcttgccaaccccaaa
gagttctaccacgaagtacatcgaccatcgcatttcttgaatttctctgccttggaagac
gccgagaacgtgggtgccgacagagaagacctgtacacataa
DBGET
integrated database retrieval system
