Octopus sinensis (East Asian common octopus): 115226098
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Entry
115226098 CDS
T07665
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
osn
Octopus sinensis (East Asian common octopus)
Brite
KEGG Orthology (KO) [BR:
osn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osn03041
]
115226098
Spliceosome [BR:
osn03041
]
Common components
Common spliceosomal components
General mRNP proteins
115226098
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
PRP38_assoc
RRM_5
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
115226098
NCBI-ProteinID:
XP_029652938
UniProt:
A0A6P7TLX2
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Position
LG29:10284259..10411430
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AA seq
688 aa
AA seq
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MADDFDVEAMLEAPYRKEDDVVKTDGRADKERRRRRSRSSSRSRSTSPVKHRRKKSRSRE
RSRSRERSRSRERSRSRDRNDRRRNHFRKYNHPNKLVGSSEKISQSRQYADYNKYNKSPD
RRSRREKAERKRSRSREKKSGRDKERRRSRTPSPPSRSRERYAGTAKRSRSRSPYKGRGA
RGEKPYRRSMSKSPLRSYEFVREPGPELSPEERDARTIFCMQLSARIRPRDLEEFFSSVG
KVRDVRLITDNKTRRSKGIAYVEFVDVECVNKALALTGQRLLGVPIMVQPSQAEKNRAAN
ATATLQKGTSGPMRLYVGSLHFNITEEMLRGIFEPFGKIDDIKLIKDHESGRLQGYGFIT
FHDAEDAKKALEQLNGFELAGRPMKVGHVTERTAENQVASILDSDDMDRAGIDLGATRRL
QLMAKLAEGTGFQIPQYVANALNMNSSGDTATPPPTPAPNLSTQSPTPMLQASAAAAAAA
ALVNLTSSAPVGVTAGGASGSIAGGGGGGGGSGGLGGVGGVGAVGTVGSVGSVGGGGSSG
TGGSTTTGQPTQAANGPPIPTQCFMLANMFDPSSESKVNWDQEIRDDVIEECNKHGGVVH
IYVDKASVLGNVYVKCPNIAAAVASVNALHGRYFAGKLITAAYVPLPNYHALFPEAVRAN
QLLLPSTQALQYSYGTALYPGMPPNISR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgattttgatgttgaagctatgctggaagctccttataggaaagaagatgac
gtcgtcaaaactgatggaagagctgacaaagaaagaagacgtcggaggagccgaagttct
agccgcagccggagtacaagtcctgtaaagcaccgaaggaaaaaaagtcgcagtcgagaa
cgcagccgcagtcgagaacgtagtcgcagtcgagaacgcagccgcagtcgagatcgcaat
gaccgcagacgcaaccatttcagaaaatataaccatccaaacaaacttgtaggcagttcc
gaaaagatttctcagtcaagacagtatgcggattacaacaaatacaataaaagccctgat
cgccgcagccgtcgtgaaaaggcagaacgtaaacgtagccgtagccgagaaaaaaagagc
ggccgtgacaaagaacgcaggcgaagtcgtactccgagccctccaagtaggagccgggaa
aggtatgcaggtactgccaagcgaagtagaagtcgctcaccgtacaagggtcgaggtgca
cgtggagagaaaccgtaccggcgtagcatgagcaagagtccgctgcggtcttatgaattt
gtcagggaacctggtcctgaattatctcccgaagaacgcgatgcccgcaccattttctgc
atgcagctctctgccagaattagaccaagagacctcgaagaatttttttcctcagttggg
aaggttcgtgatgtacgacttatcactgataacaaaacaagacgatcgaaaggcattgct
tatgtggaatttgtcgatgtggagtgtgtgaacaaggctttggccttgactggtcagcga
ctgttgggtgtccccataatggtacaaccatcacaagctgaaaagaacagagcagccaat
gcaacagccacgctacagaagggcacctcaggacccatgcgcctctacgttggttcatta
cacttcaacatcacagaagagatgttacgaggaatatttgagccatttggcaagattgat
gacatcaaattaatcaaggatcacgagtctggcagattacagggctatggattcatcaca
ttccatgatgctgaagatgcaaagaaagccctggaacaactgaatggctttgaactggct
ggtagaccaatgaaggttggtcatgtaacagagcgaaccgctgaaaatcaggtggcctct
atactggacagtgatgacatggatagggctggaattgatcttggtgctacacgcagactt
cagcttatggccaagttggctgaaggtactggcttccagatcccacaatatgtggccaat
gccctcaacatgaactcatccggagacactgctacaccaccaccaactccagctcctaat
ctatctacccagtcaccaacgcccatgctacaagcaagcgctgctgcagcggctgctgct
gctcttgtcaatctgaccagttcggcaccggttggtgttactgctggtggtgccagcgga
agtattgctggtggtggaggcggtggcggcggcagtggaggccttggtggtgtcggcggt
gtcggtgctgttggcaccgttggcagtgttggtagcgttggtggtggtggcagcagtggt
acaggcggcagtactaccacaggtcagcccacacaggctgctaatggaccaccaatcccc
acacagtgtttcatgttggctaacatgtttgacccttcttcggaatccaaggtgaactgg
gatcaagagatccgagatgatgtcattgaggagtgcaacaaacacggtggtgtagtgcac
atctatgtggacaaagcttctgtactgggcaatgtctatgtaaagtgtcccaatattgca
gcagcagtcgcatctgtcaatgcgctgcatggcagatattttgcaggcaagctgataact
gctgcgtatgtgccactgcccaactatcacgctttgtttccagaggcagtccgcgcaaac
caactcctattgccctccactcaggctctccagtacagttatgggacggcactctaccct
gggatgcctcccaatatttcacggtga
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